RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 GATA6Q92908 595 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 METTL2AQ96IZ6 378 aaKnown RBP16.03■□□□□ 0.16
PHRF1-201ENST00000264555 VAPAQ9P0L0 249 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 PPIEQ9UNP9 301 aaKnown RBP16.03■□□□□ 0.16
PHRF1-201ENST00000264555 STON1Q9Y6Q2 735 aa16.03■□□□□ 0.16
PHRF1-201ENST00000264555 COL5A3P25940 1745 aaPredicted RBP16.03■□□□□ 0.16
PHRF1-201ENST00000264555 OR5K4A6NMS3 321 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 HLA-DPB1P04440 258 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 ALDOCP09972 364 aaKnown RBP16.02■□□□□ 0.16
PHRF1-201ENST00000264555 GNSP15586 552 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 SDC1P18827 310 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 AHCYP23526 432 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 AOAHP28039 575 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 NTSR1P30989 418 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 VBP1P61758 197 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 CDKL1Q00532 357 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 HNRNPA1L2Q32P51 320 aaKnown RBP16.02■□□□□ 0.16
PHRF1-201ENST00000264555 ADGRG5Q8IZF4 528 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 ANKLE1Q8NAG6 615 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.02■□□□□ 0.165e-13■■■■□ 20.2
PHRF1-201ENST00000264555 ACPTQ9BZG2 426 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 ERVK-18Q9QC07 812 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 BTNL2Q9UIR0 455 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 GPC6Q9Y625 555 aaPredicted RBP16.02■□□□□ 0.16
PHRF1-201ENST00000264555 B4GALT2O60909 372 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 TIMP2P16035 220 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 NRG3P56975 720 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 RPS15AP62244 130 aaKnown RBP16.02■□□□□ 0.16
PHRF1-201ENST00000264555 GINS1Q14691 196 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 CARTPTQ16568 116 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 AAK1Q2M2I8 961 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 VTCN1Q7Z7D3 282 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 SLC29A1Q99808 456 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 MARCH7Q9H992 704 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 CITO14578 2027 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 COL4A1P02462 1669 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 J3QRK9 145 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 TYRP1P17643 537 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 HLA-FP30511 346 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 HSDL2Q6YN16 418 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 SUN3Q8TAQ9 357 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 NKIRAS2Q9NYR9 191 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 ACSL6Q9UKU0 697 aa16.02■□□□□ 0.16
PHRF1-201ENST00000264555 SCDO00767 359 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 RAB36O95755 333 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 TGFBR2P37173 567 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 RGNQ15493 299 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 DECR1Q16698 335 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 FAM214AQ32MH5 1076 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 CATSPEREQ5SY80 951 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 LIPIQ6XZB0 460 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 NUP54Q7Z3B4 507 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 MARCH9Q86YJ5 346 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 ZNF675Q8TD23 568 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 ASB11Q8WXH4 323 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 RNF31Q96EP0 1072 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 SLC17A9Q9BYT1 436 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 AGPAT4Q9NRZ5 378 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 SEC14L4Q9UDX3 406 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 E2F3O00716 465 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 KLKB1P03952 638 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 CXCR1P25024 350 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 MASP1P48740 699 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 RUNDC3AQ59EK9 446 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 UTS2BQ765I0 119 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 MEIOBQ8N635 442 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 FBRSQ9HAH7 460 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 TCF7L1Q9HCS4 588 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 TRIM36Q9NQ86 728 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 OR1A2Q9Y585 309 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 NME7Q9Y5B8 376 aa16.02■□□□□ 0.15
PHRF1-201ENST00000264555 GOLGA4Q13439 2230 aaKnown RBP16.01■□□□□ 0.15
PHRF1-201ENST00000264555 CPNE3O75131 537 aaKnown RBP16.01■□□□□ 0.15
PHRF1-201ENST00000264555 TACSTD2P09758 323 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 CCKBRP32239 447 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 DSG2Q14126 1118 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 ZNF367Q7RTV3 350 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 MAVSQ7Z434 540 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 ZSWIM9Q86XI8 627 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 SHKBP1Q8TBC3 707 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 LMX1AQ8TE12 382 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 RIT1Q92963 219 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 SHDQ96IW2 340 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 RC3H2Q9HBD1 1191 aaKnown RBP16.01■□□□□ 0.15
PHRF1-201ENST00000264555 CDH7Q9ULB5 785 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 A6NHS1 94 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 GPR37L1O60883 481 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 OXSR1O95747 527 aaPredicted RBP16.01■□□□□ 0.15
PHRF1-201ENST00000264555 CEBPBP17676 345 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 GRIN2CQ14957 1233 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 PROKR1Q8TCW9 393 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 EFHD2Q96C19 240 aaPredicted RBP16.01■□□□□ 0.15
PHRF1-201ENST00000264555 DTD2Q96FN9 168 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 SLC30A3Q99726 388 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 NDC1Q9BTX1 674 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 GPN1Q9HCN4 374 aaPredicted RBP16.01■□□□□ 0.15
PHRF1-201ENST00000264555 TMEM184CQ9NVA4 438 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 ZNF823P16415 610 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 DNASE1L1P49184 302 aa16.01■□□□□ 0.15
PHRF1-201ENST00000264555 ID2Q02363 134 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms