RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 COL25A1Q9BXS0 654 aaPredicted RBP21.49■■□□□ 1.03
CDX1-201ENST00000231656 ANKRD60Q9BZ19 345 aa21.49■■□□□ 1.03
CDX1-201ENST00000231656 ACTR10Q9NZ32 417 aa21.49■■□□□ 1.03
CDX1-201ENST00000231656 DNAJB9Q9UBS3 223 aa21.49■■□□□ 1.03
CDX1-201ENST00000231656 ENTPD2Q9Y5L3 495 aa21.49■■□□□ 1.03
CDX1-201ENST00000231656 GSAPA4D1B5 854 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 ARHGAP33O14559 1287 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 CAPN5O15484 640 aaPredicted RBP21.48■■□□□ 1.03
CDX1-201ENST00000231656 NDUFS4O43181 175 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 CLEC3AO75596 197 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 LINGO3P0C6S8 592 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 FAM58BPP0C7Q3 252 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 UGT2B7P16662 529 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 ZNF23P17027 643 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 HOXB6P17509 224 aaKnown RBP21.48■■□□□ 1.03
CDX1-201ENST00000231656 TBPL2Q6SJ96 375 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 FKBP9P1Q75LS8 142 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 PAGE2Q7Z2X7 111 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 ADCK2Q7Z695 626 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 UBE3DQ7Z6J8 389 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 APLFQ8IW19 511 aaPredicted RBP21.48■■□□□ 1.03
CDX1-201ENST00000231656 ARL10Q8N8L6 244 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 TMBIM1Q969X1 311 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 TM4SF18Q96CE8 201 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 DPH2Q9BQC3 489 aaPredicted RBP21.48■■□□□ 1.03
CDX1-201ENST00000231656 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.48■■□□□ 1.03
CDX1-201ENST00000231656 ARRDC1-AS1Q9H2J1 176 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 WBP11Q9Y2W2 641 aaKnown RBP21.48■■□□□ 1.03
CDX1-201ENST00000231656 MDC1Q14676 2089 aaKnown RBP21.48■■□□□ 1.03
CDX1-201ENST00000231656 OR5K3A6NET4 321 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 LILRA5A6NI73 299 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 PLOD2O00469 737 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 YKT6O15498 198 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 SMIM18P0DKX4 95 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 MPLP40238 635 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 C16orf72Q14CZ0 275 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 RGNQ15493 299 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 SLC35F3Q8IY50 421 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 FAM47BQ8NA70 645 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 RSC1A1Q92681 617 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 RGMAQ96B86 450 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 SLC38A3Q99624 504 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 TRIM4Q9C037 500 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 ZNF696Q9H7X3 374 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 TMEM184CQ9NVA4 438 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 NLGN3Q9NZ94 848 aa21.48■■□□□ 1.03
CDX1-201ENST00000231656 C2orf74A8MZ97 194 aa21.47■■□□□ 1.03
CDX1-201ENST00000231656 TBX19O60806 448 aa21.47■■□□□ 1.03
CDX1-201ENST00000231656 UBXN7O94888 489 aa21.47■■□□□ 1.03
CDX1-201ENST00000231656 TYRP1P17643 537 aa21.47■■□□□ 1.03
CDX1-201ENST00000231656 MVDP53602 400 aa21.47■■□□□ 1.03
CDX1-201ENST00000231656 MAPK12P53778 367 aa21.47■■□□□ 1.03
CDX1-201ENST00000231656 VEZF1Q14119 521 aa21.47■■□□□ 1.03
CDX1-201ENST00000231656 TMEM214Q6NUQ4 689 aaKnown RBP21.47■■□□□ 1.03
CDX1-201ENST00000231656 OOSP2Q86WS3 158 aa21.47■■□□□ 1.03
CDX1-201ENST00000231656 TTLQ8NG68 377 aa21.47■■□□□ 1.03
CDX1-201ENST00000231656 OR2I1PQ8NGU4 316 aa21.47■■□□□ 1.03
CDX1-201ENST00000231656 QRFPRQ96P65 431 aa21.47■■□□□ 1.03
CDX1-201ENST00000231656 ADI1Q9BV57 179 aa21.47■■□□□ 1.03
CDX1-201ENST00000231656 AICDAQ9GZX7 198 aa21.47■■□□□ 1.03
CDX1-201ENST00000231656 SMOC1Q9H4F8 434 aa21.47■■□□□ 1.03
CDX1-201ENST00000231656 SAMD4AQ9UPU9 718 aaKnown RBP21.47■■□□□ 1.03
CDX1-201ENST00000231656 KLHL20Q9Y2M5 609 aa21.47■■□□□ 1.03
CDX1-201ENST00000231656 CER1O95813 267 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 SYPP08247 313 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 NUDT7P0C024 238 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 DDCP20711 480 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 KDELR2P33947 212 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 BCL6P41182 706 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 MERTKQ12866 999 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 ZIC1Q15915 447 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.46■■□□□ 1.03
CDX1-201ENST00000231656 ZC3H14Q6PJT7 736 aaKnown RBP21.46■■□□□ 1.03
CDX1-201ENST00000231656 SPESP1Q6UW49 350 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 ZNF438Q7Z4V0 828 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 TRIM73Q86UV7 250 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 NUDT13Q86X67 352 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 SLC6A16Q9GZN6 736 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 MIEF1Q9NQG6 463 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 GMEB2Q9UKD1 530 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 ADAM29Q9UKF5 820 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 SNX7Q9UNH6 387 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 PCDHGA5Q9Y5G8 931 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 RNF215Q9Y6U7 377 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 ASXL3Q9C0F0 2248 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 TNFAIP8O95379 198 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 CST1P01037 141 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 MAGEA2P43356 314 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 LRRC23Q53EV4 343 aaPredicted RBP21.46■■□□□ 1.03
CDX1-201ENST00000231656 ZNF425Q6IV72 752 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 SLC35A5Q9BS91 424 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 DUSP23Q9BVJ7 150 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 GPATCH2Q9NW75 528 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 SMPD3Q9NY59 655 aaPredicted RBP21.46■■□□□ 1.03
CDX1-201ENST00000231656 LRIT1Q9P2V4 623 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 RAB23Q9ULC3 237 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 RALGAPA1Q6GYQ0 2036 aa21.46■■□□□ 1.03
CDX1-201ENST00000231656 A0A1W2PRB8 838 aa21.45■■□□□ 1.02
CDX1-201ENST00000231656 RHPN2P1A8MT19 583 aa21.45■■□□□ 1.02
CDX1-201ENST00000231656 NUDT21O43809 227 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms