RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 TUBA3EQ6PEY2 450 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 TRMT10CQ7L0Y3 403 aaKnown RBP15.67■□□□□ 0.1
USB1-211ENST00000565662 CATSPER1Q8NEC5 780 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 OR7G3Q8NG95 312 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 OR14A16Q8NHC5 309 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 ZNF473Q8WTR7 871 aaKnown RBP15.67■□□□□ 0.1
USB1-211ENST00000565662 KCTD4Q8WVF5 259 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 IFT81Q8WYA0 676 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 ART5Q96L15 291 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 PAFAH2Q99487 392 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 TRIM45Q9H8W5 580 aaPredicted RBP15.67■□□□□ 0.1
USB1-211ENST00000565662 ACTR8Q9H981 624 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 SUCOQ9UBS9 1254 aaKnown RBP15.67■□□□□ 0.1
USB1-211ENST00000565662 CLCA3PQ9Y6N3 262 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 HIVEP3Q5T1R4 2406 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 POLEQ07864 2286 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 WIPF3A6NGB9 483 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 ACSL3O95573 720 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 ALDOAP04075 364 aaKnown RBP15.66■□□□□ 0.1
USB1-211ENST00000565662 PCNAP12004 261 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 MAOAP21397 527 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 HIST1H1TP22492 207 aaPredicted RBP15.66■□□□□ 0.1
USB1-211ENST00000565662 PTX3P26022 381 aaPredicted RBP15.66■□□□□ 0.1
USB1-211ENST00000565662 BUD31P41223 144 aaPredicted RBP15.66■□□□□ 0.1
USB1-211ENST00000565662 MAGEA12P43365 314 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 STX4Q12846 297 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 OR1C1Q15619 314 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 PFKFB4Q16877 469 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 C18orf21Q32NC0 220 aaPredicted RBP15.66■□□□□ 0.1
USB1-211ENST00000565662 KHDRBS2Q5VWX1 349 aaKnown RBP15.66■□□□□ 0.1
USB1-211ENST00000565662 ZCCHC7Q8N3Z6 543 aaKnown RBP15.66■□□□□ 0.1
USB1-211ENST00000565662 TEX9Q8N6V9 391 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 MORN4Q8NDC4 146 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 MDS2Q8NDY4 140 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 OR8K3Q8NH51 312 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 RGMAQ96B86 450 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 SCMH1Q96GD3 660 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.66■□□□□ 0.1
USB1-211ENST00000565662 LYARQ9NX58 379 aaKnown RBP15.66■□□□□ 0.1
USB1-211ENST00000565662 PLA2G3Q9NZ20 509 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 LRFN1Q9P244 771 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 COPS7AQ9UBW8 275 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 FETUBQ9UGM5 382 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 ZNF490Q9ULM2 529 aaPredicted RBP15.66■□□□□ 0.1
USB1-211ENST00000565662 KLF13Q9Y2Y9 288 aaPredicted RBP15.66■□□□□ 0.1
USB1-211ENST00000565662 SPTBN1Q01082 2364 aaKnown RBP15.66■□□□□ 0.1
USB1-211ENST00000565662 HECTD1Q9ULT8 2610 aa15.66■□□□□ 0.1
USB1-211ENST00000565662 USP9XQ93008 2570 aaPredicted RBP15.65■□□□□ 0.1
USB1-211ENST00000565662 EXOC1LA0A1B0GW35 172 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 ASPDHA6ND91 283 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 MYO1DO94832 1006 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 LDLRP01130 860 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 MTHFD2P13995 350 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 CERS1P27544 350 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 TDGF1P3P51864 188 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 MLF1P58340 268 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 SRSF11Q05519 484 aaKnown RBP15.65■□□□□ 0.1
USB1-211ENST00000565662 DLG1Q12959 904 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 CUL3Q13618 768 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 BMPR2Q13873 1038 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 GTF2H2Q13888 395 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 TRADDQ15628 312 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 TECRLQ5HYJ1 363 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 DEPDC1Q5TB30 811 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 GTF2H2CQ6P1K8 395 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 BNC2Q6ZN30 1099 aaPredicted RBP15.65■□□□□ 0.1
USB1-211ENST00000565662 MYLK4Q86YV6 388 aaPredicted RBP15.65■□□□□ 0.1
USB1-211ENST00000565662 EIF1ADQ8N9N8 165 aaKnown RBP15.65■□□□□ 0.1
USB1-211ENST00000565662 L3MBTL4Q8NA19 623 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 THAP3Q8WTV1 239 aaPredicted RBP15.65■□□□□ 0.1
USB1-211ENST00000565662 MRPL57Q9BQC6 102 aaKnown RBP15.65■□□□□ 0.1
USB1-211ENST00000565662 VPS11Q9H270 941 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 PPCSQ9HAB8 311 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 WDR41Q9HAD4 459 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 SEC14L3Q9UDX4 400 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 PLEKHB1Q9UF11 243 aaPredicted RBP15.65■□□□□ 0.1
USB1-211ENST00000565662 DMGDHQ9UI17 866 aaKnown RBP15.65■□□□□ 0.1
USB1-211ENST00000565662 STK38LQ9Y2H1 464 aa15.65■□□□□ 0.1
USB1-211ENST00000565662 C4orf51C9J302 202 aa15.64■□□□□ 0.09
USB1-211ENST00000565662 FOXE1O00358 373 aaPredicted RBP15.64■□□□□ 0.09
USB1-211ENST00000565662 SEMA7AO75326 666 aa15.64■□□□□ 0.09
USB1-211ENST00000565662 SLC25A12O75746 678 aa15.64■□□□□ 0.09
USB1-211ENST00000565662 ZFAND5O76080 213 aa15.64■□□□□ 0.09
USB1-211ENST00000565662 SEMA3DO95025 777 aa15.64■□□□□ 0.09
USB1-211ENST00000565662 SNRPAP09012 282 aaKnown RBP15.64■□□□□ 0.09
USB1-211ENST00000565662 EPORP19235 508 aa15.64■□□□□ 0.09
USB1-211ENST00000565662 CD22P20273 847 aa15.64■□□□□ 0.09
USB1-211ENST00000565662 ATP5A1P25705 553 aaKnown RBP15.64■□□□□ 0.09
USB1-211ENST00000565662 HLCSP50747 726 aa15.64■□□□□ 0.09
USB1-211ENST00000565662 BTG2P78543 158 aa15.64■□□□□ 0.09
USB1-211ENST00000565662 TBL3Q12788 808 aaKnown RBP15.64■□□□□ 0.09
USB1-211ENST00000565662 RUNX2Q13950 521 aa15.64■□□□□ 0.09
USB1-211ENST00000565662 SLC25A25Q6KCM7 469 aa15.64■□□□□ 0.09
USB1-211ENST00000565662 GFRALQ6UXV0 394 aa15.64■□□□□ 0.09
USB1-211ENST00000565662 MAMDC2Q7Z304 686 aaPredicted RBP15.64■□□□□ 0.09
USB1-211ENST00000565662 VN1R5Q7Z5H4 357 aa15.64■□□□□ 0.09
USB1-211ENST00000565662 TMEM156Q8N614 296 aa15.64■□□□□ 0.09
USB1-211ENST00000565662 ACOT4Q8N9L9 421 aa15.64■□□□□ 0.09
USB1-211ENST00000565662 NOA1Q8NC60 698 aaKnown RBP15.64■□□□□ 0.09
USB1-211ENST00000565662 APCDD1LQ8NCL9 501 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms