RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 FAM46DQ8NEK8 389 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 FAM122AQ96E09 287 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 B3GNT5Q9BYG0 378 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 HRH4Q9H3N8 390 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 BCAS3Q9H6U6 928 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 MYH15Q9Y2K3 1946 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 PHYHO14832 338 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 HOXB7P09629 217 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 GRK4P32298 578 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 GJA4P35212 333 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 PRELPP51888 382 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 PRKAG1P54619 331 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 CTBSQ01459 385 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 BAMBIQ13145 260 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 ECM1Q16610 540 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 HIST2H3AQ71DI3 136 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 HS3ST5Q8IZT8 346 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 BPIFCQ8NFQ6 507 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 OR2D3Q8NGH3 330 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 METTL21AQ8WXB1 218 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 MUL1Q969V5 352 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 AMNQ9BXJ7 453 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 NMNAT1Q9HAN9 279 aaPredicted RBP8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 USP36Q9P275 1121 aaKnown RBP8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 FZD4Q9ULV1 537 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 OR6C68A6NDL8 312 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 DCNP07585 359 aaKnown RBP8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 GPD1P21695 349 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 PRRX1P54821 245 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 UBE2IP63279 158 aaKnown RBP8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 PRKCDQ05655 676 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 KLHL22Q53GT1 634 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 HYIQ5T013 277 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 CMASQ8NFW8 434 aaPredicted RBP8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 TMEM143Q96AN5 459 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 MGME1Q9BQP7 344 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 CCM2Q9BSQ5 444 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 DPY30Q9C005 99 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 EXO5Q9H790 373 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 PCDHA11Q9Y5I1 949 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 LAMC1P11047 1609 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 MYO10Q9HD67 2058 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 CDK14O94921 469 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 SYPP08247 313 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 FBP1P09467 338 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 CRHBPP24387 322 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 PSMB4P28070 264 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 RABL3Q5HYI8 236 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 PRAMEF18Q5VWM3 479 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 C18orf63Q68DL7 685 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 ADAD1Q96M93 576 aaKnown RBP8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 PGLYRP2Q96PD5 576 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 CPXM1Q96SM3 734 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 POLR2J2Q9GZM3 115 aaKnown RBP8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 SSU72Q9NP77 194 aaKnown RBP8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 TEX10Q9NXF1 929 aaPredicted RBP8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 ARHGAP28Q9P2N2 729 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 MINPP1Q9UNW1 487 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 MAGI3Q5TCQ9 1506 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 UGGT1Q9NYU2 1555 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 AGLP35573 1532 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 PRSS51A0A1B0GVH4 220 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 MTMR11A4FU01 709 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 HACD1B0YJ81 288 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 PIP5K1BO14986 540 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 SLC34A2O95436 690 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 EBLN1P0CF75 366 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 DDTP30046 118 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 CHI3L1P36222 383 aaPredicted RBP8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 TPI1P60174 286 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 MAP4K2Q12851 820 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 DCAF4L1Q3SXM0 396 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 C4orf17Q53FE4 359 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 TCTE1Q5JU00 501 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 ETV3LQ6ZN32 361 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 OR10A6Q8NH74 314 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 RXFP4Q8TDU9 374 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 SLC45A3Q96JT2 553 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 ADAM2Q99965 735 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 SLC38A1Q9H2H9 487 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 SLC28A3Q9HAS3 691 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 URGCP-MRPS24S4R325 110 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 NRXN1Q9ULB1 1477 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 PCM1Q15154 2024 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 ATP7BP35670 1465 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 CXCL14O95715 111 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 PTNP21246 168 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 FOXO4P98177 505 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 OGDHQ02218 1023 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 MFSD13AQ14CX5 517 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 GPR33Q49SQ1 333 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 GPR139Q6DWJ6 353 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 CDAN1Q8IWY9 1227 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 RFT1Q96AA3 541 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 TBX5Q99593 518 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 SLC6A5Q9Y345 797 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 DNMT1P26358 1616 aaKnown RBP8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 PGRMC2O15173 223 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 RPLP1P05386 114 aaKnown RBP8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 TPOP07202 933 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms