RNA–Protein interactions for RNA: ENST00000521604.6

TCEA1-208, Transcript of transcription elongation factor A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCEA1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-208ENST00000521604 MYLIPQ8WY64 445 aa16.97■□□□□ 0.31
TCEA1-208ENST00000521604 RETREG1Q9H6L5 497 aa16.97■□□□□ 0.31
TCEA1-208ENST00000521604 C1GALT1Q9NS00 363 aa16.97■□□□□ 0.31
TCEA1-208ENST00000521604 CORO2BQ9UQ03 480 aa16.97■□□□□ 0.31
TCEA1-208ENST00000521604 CMAHPQ9Y471 501 aa16.97■□□□□ 0.31
TCEA1-208ENST00000521604 FADS2P1A8MWK0 482 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 TPST2O60704 377 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 SLC16A8O95907 504 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 CD70P32970 193 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 CSNK1DP48730 415 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 LIM2P55344 173 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 SCN1BQ07699 218 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 LARS2Q15031 903 aaKnown RBP16.96■□□□□ 0.31
TCEA1-208ENST00000521604 SEC23BQ15437 767 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 MPEG1Q2M385 716 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 CDKL4Q5MAI5 379 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 FAM46DQ8NEK8 389 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 OR51B5Q9H339 312 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 ZDHHC6Q9H6R6 413 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.96■□□□□ 0.31
TCEA1-208ENST00000521604 FABP12A6NFH5 140 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 TBKBP1A7MCY6 615 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 NPIPB8E9PQR5 432 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 ERVH48-1M5A8F1 160 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 ALX3O95076 343 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 CSF3P09919 207 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 PPIBP23284 216 aaKnown RBP16.96■□□□□ 0.31
TCEA1-208ENST00000521604 MYL9P24844 172 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 HOXD11P31277 338 aaPredicted RBP16.96■□□□□ 0.31
TCEA1-208ENST00000521604 SNRPD2P62316 118 aaKnown RBP16.96■□□□□ 0.31
TCEA1-208ENST00000521604 GPLD1P80108 840 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 PYDC2Q56P42 97 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 C17orf99Q6UX52 265 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 TPRG1Q6ZUI0 275 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 TCEANCQ8N8B7 351 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 SETD6Q8TBK2 473 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 MIXL1Q9H2W2 232 aa16.96■□□□□ 0.31
TCEA1-208ENST00000521604 CNOT2Q9NZN8 540 aaKnown RBP16.96■□□□□ 0.31
TCEA1-208ENST00000521604 B4DXG7 233 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 RECKO95980 971 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 PUM1Q14671 1186 aaKnown RBP eCLIP16.95■□□□□ 0.3
TCEA1-208ENST00000521604 PDZK1Q5T2W1 519 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 ERAP2Q6P179 960 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 SYCE2Q6PIF2 218 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 TMPRSS11BQ86T26 416 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 RBM45Q8IUH3 476 aaKnown RBP16.95■□□□□ 0.3
TCEA1-208ENST00000521604 LAS2Q8IYD9 372 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 CBARPQ8N350 705 aaPredicted RBP16.95■□□□□ 0.3
TCEA1-208ENST00000521604 SYT14Q8NB59 555 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 WDR48Q8TAF3 677 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 GEMIN6Q8WXD5 167 aaKnown RBP16.95■□□□□ 0.3
TCEA1-208ENST00000521604 SCRN2Q96FV2 425 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 MAPKAP1Q9BPZ7 522 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 TRPV5Q9NQA5 729 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 CARD8Q9Y2G2 431 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 LSM2Q9Y333 95 aaKnown RBP16.95■□□□□ 0.3
TCEA1-208ENST00000521604 CCDC88CQ9P219 2028 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 TSPAN19P0C672 248 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 TNNI3P19429 210 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 CSTF2P33240 577 aaKnown RBP eCLIP16.95■□□□□ 0.3
TCEA1-208ENST00000521604 ASMTP46597 345 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 C11orf74Q86VG3 221 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 LSRQ86X29 649 aaPredicted RBP16.95■□□□□ 0.3
TCEA1-208ENST00000521604 CHTF18Q8WVB6 975 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 JPH3Q8WXH2 748 aaPredicted RBP16.95■□□□□ 0.3
TCEA1-208ENST00000521604 CLP1Q92989 425 aaKnown RBP16.95■□□□□ 0.3
TCEA1-208ENST00000521604 NEIL2Q969S2 332 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 SLC6A18Q96N87 628 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 CASD1Q96PB1 797 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 WFDC6Q9BQY6 131 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 WRAP53Q9BUR4 548 aaKnown RBP16.95■□□□□ 0.3
TCEA1-208ENST00000521604 SPATA9Q9BWV2 254 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 SLC22A4Q9H015 551 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 GIMAP4Q9NUV9 329 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 SNX7Q9UNH6 387 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 PCDHB7Q9Y5E2 793 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 ENPP4Q9Y6X5 453 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 TRAV19A0A0A6YYK7 116 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 SH3D21A4FU49 640 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 SMLR1H3BR10 107 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 OR10H3O60404 316 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 IGSF6O95976 241 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 GALTP07902 379 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 PBLDP30039 288 aaPredicted RBP16.95■□□□□ 0.3
TCEA1-208ENST00000521604 TIA1P31483 386 aaKnown RBP eCLIP16.95■□□□□ 0.32e-6■□□□□ 10.7
TCEA1-208ENST00000521604 KIR2DL3P43628 341 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 LIMS1P48059 325 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 C2orf80Q0P641 193 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 LMAN2Q12907 356 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 SMUG1Q53HV7 270 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 OR52N2Q8NGI0 321 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 SOCS4Q8WXH5 440 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 KLHL6Q8WZ60 621 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 TMEM80Q96HE8 168 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 GDF15Q99988 308 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 SORBS1Q9BX66 1292 aaKnown RBP16.95■□□□□ 0.3
TCEA1-208ENST00000521604 THSD1Q9NS62 852 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 TMEM39AQ9NV64 488 aa16.95■□□□□ 0.3
TCEA1-208ENST00000521604 STOX2Q9P2F5 926 aaPredicted RBP16.95■□□□□ 0.3
TCEA1-208ENST00000521604 SH2B3Q9UQQ2 575 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms