RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 ADAMTS14Q8WXS8 1223 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 GAL3ST3Q96A11 431 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 NSL1Q96IY1 281 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 SLC45A3Q96JT2 553 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 MARK4Q96L34 752 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 KCNC2Q96PR1 638 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 LRRC37BQ96QE4 947 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 MAPKAP1Q9BPZ7 522 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 C1orf50Q9BV19 199 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 NPLQ9BXD5 320 aaPredicted RBP5.63□□□□□ -1.51
USP39-213ENST00000467885 CUTCQ9NTM9 273 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 ARL8BQ9NVJ2 186 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 NOP53Q9NZM5 478 aaKnown RBP5.63□□□□□ -1.51
USP39-213ENST00000467885 ARMCX1Q9P291 453 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 MAP10Q9P2G4 905 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 ATP6V1HQ9UI12 483 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 TRIM33Q9UPN9 1127 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 CLCA2Q9UQC9 943 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 NAALAD2Q9Y3Q0 740 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 POLR3HQ9Y535 204 aaPredicted RBP5.63□□□□□ -1.51
USP39-213ENST00000467885 PCM1Q15154 2024 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 ANKRD12Q6UB98 2062 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 PCNX2A6NKB5 2137 aa5.63□□□□□ -1.51
USP39-213ENST00000467885 ASCC3Q8N3C0 2202 aaKnown RBP5.63□□□□□ -1.51
USP39-213ENST00000467885 RP1P56715 2156 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 OR2W5A6NFC9 320 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 H0YIG0 161 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 FBP2O00757 339 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 DSCR3O14972 297 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 POLR1CO15160 346 aaPredicted RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 SLC22A2O15244 555 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 AKAP10O43572 662 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 PCDH7O60245 1069 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 PRMT3O60678 531 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 DCTN3O75935 186 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 MYO1DO94832 1006 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 ZIC2O95409 532 aaPredicted RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 NSA2O95478 260 aaKnown RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 RECKO95980 971 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 FURINP09958 794 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 LAMP1P11279 417 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 PIM1P11309 404 aaPredicted RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 DRD2P14416 443 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 IL1RNP18510 177 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 ITIH1P19827 911 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 PRPS1L1P21108 318 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 CERS1P27544 350 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 PIK3R1P27986 724 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 RORAP35398 523 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 OR1D4P47884 311 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 RAP1GDS1P52306 607 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 DGKQP52824 942 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 MAPK12P53778 367 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 ARSFP54793 590 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 NME5P56597 212 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 RPL38P63173 70 aaKnown RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 MAT1AQ00266 395 aaKnown RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 TGM3Q08188 693 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 BNIP1Q12981 228 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 PDE7AQ13946 482 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 ERV3-1Q14264 604 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 KRT72Q14CN4 511 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 RPS6KA2Q15349 733 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 NDUFA9Q16795 377 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 UGT8Q16880 541 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 SYT16Q17RD7 645 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 MUM1Q2TAK8 710 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.62□□□□□ -1.51
USP39-213ENST00000467885 AGKQ53H12 422 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 ZNF385BQ569K4 471 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 HES3Q5TGS1 186 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 YOD1Q5VVQ6 348 aaPredicted RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 C18orf63Q68DL7 685 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 RHBDD2Q6NTF9 364 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 TRIM40Q6P9F5 258 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 ZNF517Q6ZMY9 492 aaPredicted RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 TTLL10Q6ZVT0 673 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 ABHD13Q7L211 337 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 OVCH1Q7RTY7 1134 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 PAGE2Q7Z2X7 111 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 TIPARPQ7Z3E1 657 aaKnown RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 PPP1R3BQ86XI6 285 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 TMEM151BQ8IW70 566 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 GPR135Q8IZ08 494 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 CA13Q8N1Q1 262 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 MIER2Q8N344 545 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 TMEM52Q8NDY8 209 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 OR7A2PQ8NGA2 310 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 OR5T3Q8NGG3 340 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 OR9I1Q8NGQ6 314 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 OR51Q1Q8NH59 317 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 DNAJB14Q8TBM8 379 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 TSPEARQ8WU66 669 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 N4BP2L2Q92802 583 aaPredicted RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 GFM2Q969S9 779 aaKnown RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 PMEPA1Q969W9 287 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 ANKRD9Q96BM1 317 aaPredicted RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 ITPKCQ96DU7 683 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 LIN37Q96GY3 246 aaPredicted RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 ZNF681Q96N22 645 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms