RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 C5orf64Q2M2E5 130 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 DEFB115Q30KQ5 88 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 NDUFAF6Q330K2 333 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 CRY2Q49AN0 593 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 CELF3Q5SZQ8 465 aaKnown RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 RNLSQ5VYX0 342 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 LRRC66Q68CR7 880 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 TMEM200BQ69YZ2 307 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 FRMPD2BQ6IN97 320 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 RPL13AP3Q6NVV1 102 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 KCTD9Q7L273 389 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 GDPD3Q7L5L3 318 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 SPATA19Q7Z5L4 167 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 CUZD1Q86UP6 607 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 DHFR2Q86XF0 187 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 FOXP4Q8IVH2 680 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 LINC00346Q8IVM7 164 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 GSPT2Q8IYD1 628 aaKnown RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 ABRAQ8N0Z2 381 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 CENPSQ8N2Z9 138 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 ZNF561Q8N587 486 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 WDTC1Q8N5D0 677 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 FAM89BQ8N5H3 189 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 CCDC185Q8N715 623 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 ACBD4Q8NC06 268 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 GRHL3Q8TE85 626 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 CASKIN2Q8WXE0 1202 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 SNX19Q92543 992 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 KAT2AQ92830 837 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 BCL2L2Q92843 193 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 FBXW5Q969U6 566 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 EXOSC8Q96B26 276 aaKnown RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 S100PBPQ96BU1 408 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 HAVCR1Q96D42 359 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 FAM210BQ96KR6 192 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 C10orf90Q96M02 699 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 PACRGQ96M98 296 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 RNF145Q96MT1 663 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 ZNF416Q9BWM5 594 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 TP63Q9H3D4 680 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 VAT1LQ9HCJ6 419 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 CHRAC1Q9NRG0 131 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 PCDHB16Q9NRJ7 776 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 MED17Q9NVC6 651 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 PANK4Q9NVE7 773 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 HIF1ANQ9NWT6 349 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 TEX10Q9NXF1 929 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLCO1C1Q9NYB5 712 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 GPRC5DQ9NZD1 345 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 PDP1Q9P0J1 537 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 IGSF9Q9P2J2 1179 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 ABCD2Q9UBJ2 740 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 EIF3KQ9UBQ5 218 aaKnown RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 CBLCQ9ULV8 474 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 COPS3Q9UNS2 423 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 MGAT4BQ9UQ53 548 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 RBMX2Q9Y388 322 aaKnown RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 PLEKHM1Q9Y4G2 1056 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 KCNE2Q9Y6J6 123 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 COL3A1P02461 1466 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 C1orf167Q5SNV9 1468 aa4.53□□□□□ -1.68
HMGB3P9-201ENST00000441799 CDC42BPGQ6DT37 1551 aa4.53□□□□□ -1.69
HMGB3P9-201ENST00000441799 A0A0G2JNJ9 132 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 TCRBV16S1A1N1A0A5B0 115 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 SLC5A10A0PJK1 596 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 FAM92AA1XBS5 289 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 MGAT4DA6NG13 374 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 ANKDD1BA6NHY2 528 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 A6NIZ1 184 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 SIGLEC16A6NMB1 481 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 ERI2A8K979 691 aaKnown RBP4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 FOXE1O00358 373 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 CCSO14618 274 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 HNRNPDLO14979 420 aaKnown RBP4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 STX7O15400 261 aaKnown RBP4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 DFNA5O60443 496 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 CCNT2O60583 730 aaKnown RBP4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 NDUFS2O75306 463 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 LRCH4O75427 683 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 NDUFS3O75489 264 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 WBP4O75554 376 aaKnown RBP4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 SCGB2A1O75556 95 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 SULT1C4O75897 302 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 DFFBO76075 338 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 PDE9AO76083 593 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 TNFRSF6BO95407 300 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 OAS1P00973 400 aaKnown RBP4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 IFNA10P01566 189 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 PIGRP01833 764 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 TMEM191BP0C7N4 346 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 GIMD1P0DJR0 217 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 HSPD1P10809 573 aaKnown RBP4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 NR2C1P13056 603 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 CYP11B1P15538 503 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 ZNF26P17031 533 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 LBPP18428 481 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 EPORP19235 508 aa4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 DDX6P26196 483 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 OTX1P32242 354 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P9-201ENST00000441799 NSFP46459 744 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms