RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 PEX2P28328 305 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 PPP1CAP62136 330 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 SUZ12Q15022 739 aaKnown RBP17.22■□□□□ 0.35
VIM-201ENST00000224237 PRSS53Q2L4Q9 553 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 C14orf28Q4W4Y0 310 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 TBCELQ5QJ74 424 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 ERICH5Q6P6B1 374 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 ZNF438Q7Z4V0 828 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.22■□□□□ 0.35
VIM-201ENST00000224237 DNAJC9Q8WXX5 260 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 ABCG4Q9H172 646 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 NEUROD4Q9HD90 331 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 TMEM74BQ9NUR3 256 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 LYARQ9NX58 379 aaKnown RBP17.22■□□□□ 0.35
VIM-201ENST00000224237 TAS2R7Q9NYW3 318 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 ANAPC2Q9UJX6 822 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 ASB4Q9Y574 426 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 NUP214P35658 2090 aaPredicted RBP17.22■□□□□ 0.35
VIM-201ENST00000224237 TMEM221A6NGB7 291 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 M0R296 226 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 ZSCAN9O15535 394 aaPredicted RBP17.22■□□□□ 0.35
VIM-201ENST00000224237 HNRNPRO43390 633 aaKnown RBP17.22■□□□□ 0.35
VIM-201ENST00000224237 PROS1P07225 676 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 ACADSP16219 412 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 ATP6V1C1P21283 382 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 FRKP42685 505 aaPredicted RBP17.22■□□□□ 0.35
VIM-201ENST00000224237 CTSKP43235 329 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 OGFRL1Q5TC84 451 aaPredicted RBP17.22■□□□□ 0.35
VIM-201ENST00000224237 ZNF551Q7Z340 670 aaPredicted RBP17.22■□□□□ 0.35
VIM-201ENST00000224237 C1orf210Q8IVY1 113 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 UTP15Q8TED0 518 aaKnown RBP17.22■□□□□ 0.35
VIM-201ENST00000224237 GAB3Q8WWW8 586 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 ZBED6CLQ96FA7 236 aaPredicted RBP17.22■□□□□ 0.35
VIM-201ENST00000224237 SLC35A5Q9BS91 424 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 KLHL4Q9C0H6 718 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 CSNK1G3Q9Y6M4 447 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 P2RX6O15547 441 aa17.21■□□□□ 0.35
VIM-201ENST00000224237 ZNF888P0CJ79 500 aaPredicted RBP17.21■□□□□ 0.35
VIM-201ENST00000224237 ZNF10P21506 573 aaPredicted RBP17.21■□□□□ 0.35
VIM-201ENST00000224237 CDH3P22223 829 aa17.21■□□□□ 0.35
VIM-201ENST00000224237 PCBP4P57723 403 aaKnown RBP17.21■□□□□ 0.35
VIM-201ENST00000224237 MANEAQ5SRI9 462 aa17.21■□□□□ 0.35
VIM-201ENST00000224237 LPCAT4Q643R3 524 aa17.21■□□□□ 0.35
VIM-201ENST00000224237 CPZQ66K79 652 aa17.21■□□□□ 0.35
VIM-201ENST00000224237 FRMPD2BQ6IN97 320 aa17.21■□□□□ 0.35
VIM-201ENST00000224237 ABHD13Q7L211 337 aa17.21■□□□□ 0.35
VIM-201ENST00000224237 TMEM102Q8N9M5 508 aaPredicted RBP17.21■□□□□ 0.35
VIM-201ENST00000224237 CATSPER1Q8NEC5 780 aa17.21■□□□□ 0.35
VIM-201ENST00000224237 PNPT1Q8TCS8 783 aaKnown RBP17.21■□□□□ 0.35
VIM-201ENST00000224237 LRTOMTQ8WZ04 291 aa17.21■□□□□ 0.35
VIM-201ENST00000224237 OR5P2Q8WZ92 322 aa17.21■□□□□ 0.35
VIM-201ENST00000224237 POP5Q969H6 163 aaKnown RBP17.21■□□□□ 0.35
VIM-201ENST00000224237 NCLNQ969V3 563 aa17.21■□□□□ 0.35
VIM-201ENST00000224237 FAM162AQ96A26 154 aa17.21■□□□□ 0.35
VIM-201ENST00000224237 PPWD1Q96BP3 646 aaKnown RBP17.21■□□□□ 0.35
VIM-201ENST00000224237 ZNF184Q99676 751 aaPredicted RBP17.21■□□□□ 0.35
VIM-201ENST00000224237 BATF3Q9NR55 127 aa17.21■□□□□ 0.35
VIM-201ENST00000224237 SUSD2Q9UGT4 822 aa17.21■□□□□ 0.35
VIM-201ENST00000224237 TTC28Q96AY4 2481 aa17.21■□□□□ 0.35
VIM-201ENST00000224237 WDFY4Q6ZS81 3184 aa17.21■□□□□ 0.34
VIM-201ENST00000224237 TMEM131Q92545 1883 aa17.21■□□□□ 0.34
VIM-201ENST00000224237 H0YGG7 62 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 PEX1O43933 1283 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 RETP07949 1114 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 SMIM10L1P0DMW3 83 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 MANFP55145 182 aaKnown RBP17.2■□□□□ 0.34
VIM-201ENST00000224237 ARF3P61204 181 aaPredicted RBP17.2■□□□□ 0.34
VIM-201ENST00000224237 BTN3A2P78410 334 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 RGNQ15493 299 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 LRRC36Q1X8D7 754 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 C6orf132Q5T0Z8 1188 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 ZCCHC8Q6NZY4 707 aaKnown RBP17.2■□□□□ 0.34
VIM-201ENST00000224237 ERMP1Q7Z2K6 904 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 C19orf47Q8N9M1 422 aaKnown RBP17.2■□□□□ 0.34
VIM-201ENST00000224237 PAPD5Q8NDF8 572 aaKnown RBP17.2■□□□□ 0.34
VIM-201ENST00000224237 EXOSC8Q96B26 276 aaKnown RBP17.2■□□□□ 0.34
VIM-201ENST00000224237 SMIM10Q96HG1 83 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 ACSS1Q9NUB1 689 aaPredicted RBP17.2■□□□□ 0.34
VIM-201ENST00000224237 C5AR2Q9P296 337 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 FBXW2Q9UKT8 454 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 ATG4BQ9Y4P1 393 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 SNX11Q9Y5W9 270 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 CACNA1EQ15878 2313 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 LOC105369274A0A096LPK9 316 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 LOC102723532A0A0G2JNH3 316 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 PRAMEF10O60809 474 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 CREG1O75629 220 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 TIPRLO75663 272 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 KCNK5O95279 499 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 C1QCP02747 245 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 FCGR1AP12314 374 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 ST6GAL1P15907 406 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 ARRB1P49407 418 aaPredicted RBP17.2■□□□□ 0.34
VIM-201ENST00000224237 EPHA4P54764 986 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 BNC1Q01954 994 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 MLC1Q15049 377 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 VMACQ2NL98 169 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 GRAMD1BQ3KR37 738 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 IRGCQ6NXR0 463 aa17.2■□□□□ 0.34
VIM-201ENST00000224237 FAM180BQ6P0A1 224 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms