RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 DIABLOQ9NR28 239 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 TM7SF3Q9NS93 570 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 SERGEFQ9UGK8 458 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 SH2B3Q9UQQ2 575 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 INVSQ9Y283 1065 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 GRIP1Q9Y3R0 1128 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 DOCK8Q8NF50 2099 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 PRUNE2Q8WUY3 3088 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 KIF26AQ9ULI4 1882 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 GSTA4O15217 222 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 APODP05090 189 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 HNF4AP41235 474 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 OR2B6P58173 313 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 PPP2R2BQ00005 443 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 CSTF3Q12996 717 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 NPTX1Q15818 432 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 CST6Q15828 149 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 ATAT1Q5SQI0 421 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 OR4F3Q6IEY1 312 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 CAPN13Q6MZZ7 669 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 C11orf96Q7Z7L8 435 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 CCDC28AQ8IWP9 274 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 OR7G3Q8NG95 312 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 OR2L2Q8NH16 312 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 CSGALNACT1Q8TDX6 532 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 RAB7BQ96AH8 199 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 ZHX1-C8orf76Q96EF9 292 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 ZNF514Q96K75 400 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 RBM4BQ9BQ04 359 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 RBM4Q9BWF3 364 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 RUBCNLQ9H714 662 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 C12orf10Q9HB07 376 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 SERHLQ9NQF3 203 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 GPRC5BQ9NZH0 403 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 KCNN3Q9UGI6 736 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 PLAGL1Q9UM63 463 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 PRR23AA6NEV1 266 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 METTL15A6NJ78 407 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 H0YIV9 168 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 TIE1P35590 1138 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 CDKN2CP42773 168 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 TAS2R38P59533 333 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 ACSM2AQ08AH3 577 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 CDONQ4KMG0 1287 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 FAM98BQ52LJ0 330 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 COLEC12Q5KU26 742 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 SNAP47Q5SQN1 464 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 ACSM2BQ68CK6 577 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 LSMEM1Q8N8F7 131 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 GPR156Q8NFN8 814 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 HUS1BQ8NHY5 278 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 MRPL38Q96DV4 380 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 SPATA6Q9NWH7 488 aaPredicted RBP16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 SLC23A2Q9UGH3 650 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 GPR34Q9UPC5 381 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 ASF1AQ9Y294 204 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 TPRKBQ9Y3C4 175 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 ATG2BQ96BY7 2078 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 LOC100130705A0A1B0GUX0 176 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 A0A1W2PP55 124 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 MGAT4DA6NG13 374 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 B8ZZF3 427 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 VEGFDO43915 354 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 JUNDP17535 347 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 GGT1P19440 569 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 KCNAB2Q13303 367 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 CLCA4Q14CN2 919 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 WSCD2Q2TBF2 565 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 ITPRIPL2Q3MIP1 535 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 RUNDC3AQ59EK9 446 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 AGBL4Q5VU57 503 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 FAM9CQ8IZT9 166 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 ESX1Q8N693 406 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 OR9A1PQ8NGU1 263 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 JPH3Q8WXH2 748 aaPredicted RBP16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 KLK6Q92876 244 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 LINC00615Q96LM1 132 aaPredicted RBP16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 IL17FQ96PD4 163 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 DUSP21Q9H596 190 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 C3orf18Q9UK00 162 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 OR1A2Q9Y585 309 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 PCDHGA10Q9Y5H3 936 aa16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 CFAP20Q9Y6A4 193 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-205ENST00000594973 SERTM1A2A2V5 107 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 SLC16A6O15403 523 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 TRAPPC2P0DI81 140 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 TRAPPC2BP0DI82 140 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 LAMP2P13473 410 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 NPPBP16860 134 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 PIGAP37287 484 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 MEF2AQ02078 507 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 CDK5R2Q13319 367 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 SUZ12Q15022 739 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 SLCO4C1Q6ZQN7 724 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 HORMAD1Q86X24 394 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 C10orf111Q8N326 155 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 HDDC3Q8N4P3 179 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 C1orf52Q8N6N3 182 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 FAM83FQ8NEG4 500 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 ZNF548Q8NEK5 533 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms