RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 C15orf38-AP3S2A0A0A6YYH1 394 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 TBX19O60806 448 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 ERN1O75460 977 aaKnown RBP19.75■□□□□ 0.75
PNKP-203ENST00000593946 C9P02748 559 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 FAM58BPP0C7Q3 252 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 HOXB9P17482 250 aaPredicted RBP19.75■□□□□ 0.75
PNKP-203ENST00000593946 ENGP17813 658 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 DDCP20711 480 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 PTPN6P29350 595 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 CSF2RBP32927 897 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 VSX2P58304 361 aaPredicted RBP19.75■□□□□ 0.75
PNKP-203ENST00000593946 SNRPNP63162 240 aaKnown RBP19.75■□□□□ 0.75
PNKP-203ENST00000593946 SLC9A5Q14940 896 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 HEPACAMQ14CZ8 416 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 AMZ1Q400G9 498 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 SAMD4BQ5PRF9 694 aaKnown RBP19.75■□□□□ 0.75
PNKP-203ENST00000593946 ARPINQ7Z6K5 226 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 PLXDC1Q8IUK5 500 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 CSNK1A1LQ8N752 337 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 RNF148Q8N7C7 305 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 PPCDCQ96CD2 204 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 ZNF764Q96H86 408 aaPredicted RBP19.75■□□□□ 0.75
PNKP-203ENST00000593946 INPP5KQ9BT40 448 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 GTPBP2Q9BX10 602 aaKnown RBP19.75■□□□□ 0.75
PNKP-203ENST00000593946 CMTM6Q9NX76 183 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 TEX10Q9NXF1 929 aaPredicted RBP19.75■□□□□ 0.75
PNKP-203ENST00000593946 POMPQ9Y244 141 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 ADAMTS20P59510 1910 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 PRSS51A0A1B0GVH4 220 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 PRORSD1PA6NEY8 169 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 EIF2S1P05198 315 aaKnown RBP19.74■□□□□ 0.75
PNKP-203ENST00000593946 ME2P23368 584 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 CERS1P27544 350 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 GABRA4P48169 554 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 SLAMF1Q13291 335 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 KPNB1Q14974 876 aaKnown RBP19.74■□□□□ 0.75
PNKP-203ENST00000593946 DEFB110Q30KQ9 67 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 RABL3Q5HYI8 236 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 WASHC2DQ5SRD0 308 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 ANXA8L1Q5VT79 327 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 C1orf146Q5VVC0 180 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 TMEM214Q6NUQ4 689 aaKnown RBP19.74■□□□□ 0.75
PNKP-203ENST00000593946 GUSBP11Q6P575 273 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 WDR74Q6RFH5 385 aaPredicted RBP19.74■□□□□ 0.75
PNKP-203ENST00000593946 MCATQ8IVS2 390 aaKnown RBP19.74■□□□□ 0.75
PNKP-203ENST00000593946 MSRB3Q8IXL7 192 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 EID2Q8N6I1 236 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 MIEF2Q96C03 454 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 CCDC115Q96NT0 180 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 CCDC3Q9BQI4 270 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 TRIM8Q9BZR9 551 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 MIEF1Q9NQG6 463 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 SLC6A13Q9NSD5 602 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 SLC25A37Q9NYZ2 338 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 BTNL2Q9UIR0 455 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 ASB4Q9Y574 426 aa19.74■□□□□ 0.75
PNKP-203ENST00000593946 EME2A4GXA9 379 aaPredicted RBP19.73■□□□□ 0.75
PNKP-203ENST00000593946 TNFRSF10AO00220 468 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 RNASET2O00584 256 aaKnown RBP19.73■□□□□ 0.75
PNKP-203ENST00000593946 MAP3K7O43318 606 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 ZBTB11O95625 1053 aaPredicted RBP19.73■□□□□ 0.75
PNKP-203ENST00000593946 TRPC1P48995 793 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 BTN3A2P78410 334 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 SUZ12Q15022 739 aaKnown RBP19.73■□□□□ 0.75
PNKP-203ENST00000593946 MUM1Q2TAK8 710 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 PLA2G2CQ5R387 149 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 DNAJC14Q6Y2X3 702 aaPredicted RBP19.73■□□□□ 0.75
PNKP-203ENST00000593946 ABHD13Q7L211 337 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 TICAM1Q8IUC6 712 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 OR8J3Q8NGG0 315 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 ZCCHC10Q8TBK6 192 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 ANKRD27Q96NW4 1050 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 ROGDIQ9GZN7 287 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 COPS7BQ9H9Q2 264 aaPredicted RBP19.73■□□□□ 0.75
PNKP-203ENST00000593946 SEMA5BQ9P283 1151 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 RAB23Q9ULC3 237 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 PCDHB14Q9Y5E9 798 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 PRR33A8MZF0 331 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 RFXANKO14593 260 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 KHNYNO15037 678 aaKnown RBP19.73■□□□□ 0.75
PNKP-203ENST00000593946 SRPX2O60687 465 aaPredicted RBP19.73■□□□□ 0.75
PNKP-203ENST00000593946 MLLT3P42568 568 aaPredicted RBP19.73■□□□□ 0.75
PNKP-203ENST00000593946 CDKN2CP42773 168 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 LRRC74AQ0VAA2 488 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 RIPK1Q13546 671 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 PRSS53Q2L4Q9 553 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 MPEG1Q2M385 716 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 SPATS1Q496A3 300 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 C6orf163Q5TEZ5 329 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 TCEAL6Q6IPX3 200 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 CLECL1Q8IZS7 167 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 VPS37AQ8NEZ2 397 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 TCEAL3Q969E4 200 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 NLNQ9BYT8 704 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 PDE7BQ9NP56 450 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 SUCOQ9UBS9 1254 aaKnown RBP19.73■□□□□ 0.75
PNKP-203ENST00000593946 ERVK-11Q9UQG0 969 aa19.73■□□□□ 0.75
PNKP-203ENST00000593946 ENTPD5O75356 428 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 ZNF883P0CG24 379 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 HSD17B1P14061 328 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms