RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 PCDHGB6Q9Y5F9 930 aa12.35□□□□□ -0.43
HNRNPC-205ENST00000553300 SVILO95425 2214 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 A0A087WUV0 522 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 IGKV3D-11A0A0A0MRZ8 115 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 BLACEA4D250 179 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 ANKUB1A6NFN9 424 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 KLK8O60259 260 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 UGDHO60701 494 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 AGFG2O95081 481 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 TBX6O95947 436 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 RBP1P09455 135 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 COL6A2P12110 1019 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 EDN3P14138 238 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 EPORP19235 508 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 CD22P20273 847 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 ECHS1P30084 290 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 MSH2P43246 934 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 PLA2G16P53816 162 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 RAB38P57729 211 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 SLC26A5P58743 744 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 BTG2P78543 158 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 IRF9Q00978 393 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 SRSF1Q07955 248 aaKnown RBP eCLIP12.34□□□□□ -0.431e-8■■■□□ 14.8
HNRNPC-205ENST00000553300 RUNX2Q13950 521 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 SETDB1Q15047 1291 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 TERF2Q15554 542 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 PFKFB4Q16877 469 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 TSNAXIP1Q2TAA8 658 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 EIF2S3LQ2VIR3 472 aaKnown RBP12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 ACER2Q5QJU3 275 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 LIPJQ5W064 366 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 VN1R5Q7Z5H4 357 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 ZNF595Q8IYB9 648 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 SHISA5Q8N114 240 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 DNAJB8Q8NHS0 232 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 ELP5Q8TE02 316 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 GRHL3Q8TE85 626 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 REPS1Q96D71 796 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 CMTM7Q96FZ5 175 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 PAFAH2Q99487 392 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 CENPKQ9BS16 269 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 TBCDQ9BTW9 1192 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 VPS11Q9H270 941 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 TSC22D4Q9Y3Q8 395 aa12.34□□□□□ -0.43
HNRNPC-205ENST00000553300 SAGE2PA6NJ88 616 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 C4orf51C9J302 202 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 PRAMEF2O60811 474 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 GMPRP36959 345 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 PIK3CBP42338 1070 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 MAGEA12P43365 314 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 ARFIP1P53367 373 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 PHEXP78562 749 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 MRPL49Q13405 166 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 PCBP2Q15366 365 aaKnown RBP eCLIP12.33□□□□□ -0.442e-70■■■□□ 16.7
HNRNPC-205ENST00000553300 GRHL2Q6ISB3 625 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 TRMT10CQ7L0Y3 403 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 CYP4X1Q8N118 509 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 TEX9Q8N6V9 391 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 HORMAD2Q8N7B1 307 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 OR7G3Q8NG95 312 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 PRR7Q8TB68 274 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 ZNF473Q8WTR7 871 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 MAGEB10Q96LZ2 347 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 QRFPRQ96P65 431 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 GPR78Q96P69 363 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 F2RL3Q96RI0 385 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 MS4A8Q9BY19 250 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 LYRM4Q9HD34 91 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 PRDM7Q9NQW5 492 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 DAPP1Q9UN19 280 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 NTNG1Q9Y2I2 539 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 ASB1Q9Y576 335 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 PCDHGA11Q9Y5H2 935 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 SPACA6W5XKT8 324 aa12.33□□□□□ -0.44
HNRNPC-205ENST00000553300 A0A0G2JN53 185 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 FAM227AF5H4B4 570 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 CTNSO60931 367 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 SCELO95171 688 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 DDAH2O95865 285 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 CRYABP02511 175 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 ABHD2P08910 425 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 MAOAP21397 527 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 LIM2P55344 173 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 SLC13A2Q13183 592 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 GTF2H2Q13888 395 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 AP5B1Q2VPB7 878 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 GTF2H2CQ6P1K8 395 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 RPS19BP1Q86WX3 136 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 SCUBE1Q8IWY4 988 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 SLX1AQ9BQ83 275 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 UTP23Q9BRU9 249 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 ACTR8Q9H981 624 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 PRM3Q9NNZ6 103 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 NECTIN3Q9NQS3 549 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 PRTFDC1Q9NRG1 225 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 OLAHQ9NV23 265 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 PSD3Q9NYI0 1048 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 NFU1Q9UMS0 254 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 ZGRF1Q86YA3 2104 aa12.32□□□□□ -0.44
HNRNPC-205ENST00000553300 EXOC1LA0A1B0GW35 172 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms