RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 UBE3DQ7Z6J8 389 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 CYP4X1Q8N118 509 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 RNF175Q8N4F7 328 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 TMEM52Q8NDY8 209 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 OR7G3Q8NG95 312 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 SERINC2Q96SA4 455 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 NPAS2Q99743 824 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 NPLQ9BXD5 320 aaPredicted RBP12.1□□□□□ -0.47
HDAC1-209ENST00000484305 MS4A8Q9BY19 250 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 SLC29A3Q9BZD2 475 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 KCNK13Q9HB14 408 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 MMP25Q9NPA2 562 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 PRDM7Q9NQW5 492 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 ANGPTL3Q9Y5C1 460 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 COL12A1Q99715 3063 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 HIVEP3Q5T1R4 2406 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 USP9XQ93008 2570 aaPredicted RBP12.1□□□□□ -0.47
HDAC1-209ENST00000484305 HECTD1Q9ULT8 2610 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 LRRK2Q5S007 2527 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 A0A088AWK7 358 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 EXOC1LA0A1B0GW35 172 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 A8MUA0 341 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 TGFBR3LH3BV60 316 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 MAN1A2O60476 641 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 TGFB1P01137 390 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 ABHD2P08910 425 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 ZNF10P21506 573 aaPredicted RBP12.09□□□□□ -0.47
HDAC1-209ENST00000484305 CNTFP26441 200 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 ST13P50502 369 aaKnown RBP12.09□□□□□ -0.47
HDAC1-209ENST00000484305 MTTPP55157 894 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 LIM2P55344 173 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 GTF2H2Q13888 395 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 EIF2S3LQ2VIR3 472 aaKnown RBP12.09□□□□□ -0.47
HDAC1-209ENST00000484305 ACER2Q5QJU3 275 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 GTF2H2CQ6P1K8 395 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 ZNF793Q6ZN11 406 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 TRMT10CQ7L0Y3 403 aaKnown RBP12.09□□□□□ -0.47
HDAC1-209ENST00000484305 TAOK1Q7L7X3 1001 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 GOLGA7Q7Z5G4 137 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 ZGRF1Q86YA3 2104 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 MYLK4Q86YV6 388 aaPredicted RBP12.09□□□□□ -0.47
HDAC1-209ENST00000484305 CRLF3Q8IUI8 442 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 KIF2BQ8N4N8 673 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 FAM26EQ8N5C1 309 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 FAM47BQ8NA70 645 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 NFAM1Q8NET5 270 aaPredicted RBP12.09□□□□□ -0.47
HDAC1-209ENST00000484305 ELP5Q8TE02 316 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 GRHL3Q8TE85 626 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 UBE2E3Q969T4 207 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 SCYL1Q96KG9 808 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 ZNF354BQ96LW1 612 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 CSF3RQ99062 836 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 RNF32Q9H0A6 362 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.09□□□□□ -0.47
HDAC1-209ENST00000484305 COPS7BQ9H9Q2 264 aaPredicted RBP12.09□□□□□ -0.47
HDAC1-209ENST00000484305 TEKT2Q9UIF3 430 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 DAPP1Q9UN19 280 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 CLDN16Q9Y5I7 305 aa12.09□□□□□ -0.47
HDAC1-209ENST00000484305 TRAV17A0A0B4J275 112 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 OR5H15A6NDH6 313 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 SAP18O00422 153 aaKnown RBP12.08□□□□□ -0.48
HDAC1-209ENST00000484305 RTCAO00442 366 aaKnown RBP12.08□□□□□ -0.48
HDAC1-209ENST00000484305 CYR61O00622 381 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 E2F3O00716 465 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 RIPK2O43353 540 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 SNRPAP09012 282 aaKnown RBP12.08□□□□□ -0.48
HDAC1-209ENST00000484305 RBP1P09455 135 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 COL6A2P12110 1019 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 ATP5A1P25705 553 aaKnown RBP12.08□□□□□ -0.48
HDAC1-209ENST00000484305 TGM3Q08188 693 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 DDX39BQ13838 428 aaKnown RBP12.08□□□□□ -0.48
HDAC1-209ENST00000484305 TSNAXIP1Q2TAA8 658 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 LIPJQ5W064 366 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 RPUSD3Q6P087 351 aaKnown RBP12.08□□□□□ -0.48
HDAC1-209ENST00000484305 ADGRD1Q6QNK2 874 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 CHSY3Q70JA7 882 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 SCUBE1Q8IWY4 988 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 GSPT2Q8IYD1 628 aaKnown RBP12.08□□□□□ -0.48
HDAC1-209ENST00000484305 BEST3Q8N1M1 668 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 PTGR2Q8N8N7 351 aaPredicted RBP12.08□□□□□ -0.48
HDAC1-209ENST00000484305 ACOT4Q8N9L9 421 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 ARMC2Q8NEN0 867 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 HUS1BQ8NHY5 278 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 PHF21BQ96EK2 531 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 KCNC2Q96PR1 638 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 MTERF1Q99551 399 aaKnown RBP12.08□□□□□ -0.48
HDAC1-209ENST00000484305 MAPKAP1Q9BPZ7 522 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 TBCDQ9BTW9 1192 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 TXLNGYQ9BZA5 131 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 OR51B5Q9H339 312 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 IPPKQ9H8X2 491 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 ACTR8Q9H981 624 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 PRM3Q9NNZ6 103 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 PRTFDC1Q9NRG1 225 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 AGPAT4Q9NRZ5 378 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 KCMF1Q9P0J7 381 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 XPR1Q9UBH6 696 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 RNF11Q9Y3C5 154 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 MMACHCQ9Y4U1 282 aa12.08□□□□□ -0.48
HDAC1-209ENST00000484305 TNPO3Q9Y5L0 923 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms