RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 C16orf72Q14CZ0 275 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 TRIP10Q15642 601 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 ALX1Q15699 326 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 LETM2Q2VYF4 491 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 KLHL38Q2WGJ6 581 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 TRIM16LQ309B1 348 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 CCDC137Q6PK04 289 aaKnown RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 ASB18Q6ZVZ8 466 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 PLEKHM3Q6ZWE6 761 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 KRT77Q7Z794 578 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 SLFN11Q7Z7L1 901 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 TMEM219Q86XT9 240 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 TBC1D10CQ8IV04 446 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 TTC5Q8N0Z6 440 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 ANKRD13CQ8N6S4 541 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 Q8N9P0 234 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 PAPD5Q8NDF8 572 aaKnown RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 OR52I2Q8NH67 350 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 ZNF420Q8TAQ5 688 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 WDR20Q8TBZ3 569 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 DTX3LQ8TDB6 740 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 TMEM255BQ8WV15 326 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 RASSF5Q8WWW0 418 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 ART4Q93070 314 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 PHF21AQ96BD5 680 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 RMDN1Q96DB5 314 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 SPACA9Q96E40 222 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 ARSGQ96EG1 525 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 MED30Q96HR3 178 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 NSMCE3Q96MG7 304 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 MS4A10Q96PG2 267 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 KCNK16Q96T55 309 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 CYTH2Q99418 400 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 SERPINI1Q99574 410 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 FERMT1Q9BQL6 677 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 NEURL2Q9BR09 285 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 ZPBPQ9BS86 351 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 SYT17Q9BSW7 474 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 TSSK1BQ9BXA7 367 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 TRIM9Q9C026 710 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 TPK1Q9H3S4 243 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 CD93Q9NPY3 652 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 SH3GLB2Q9NR46 395 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 DDX18Q9NVP1 670 aaKnown RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 HAO2Q9NYQ3 351 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 C5AR2Q9P296 337 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 KLHL9Q9P2J3 617 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 FETUBQ9UGM5 382 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 SLC24A2Q9UI40 661 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 CCPG1Q9ULG6 757 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 OR2W1Q9Y3N9 320 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 YIPF1Q9Y548 306 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 BAZ2AQ9UIF9 1905 aaKnown RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 COL24A1Q17RW2 1714 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 SF3B1O75533 1304 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 RGPD3A6NKT7 1758 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 RGPD4Q7Z3J3 1758 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 DOCK7Q96N67 2140 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 ARFGEF1Q9Y6D6 1849 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 A0A0G2JND7 137 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 GOLGA8QA0A0J9YX86 632 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 ZCWPW2A0A1B0GU75 182 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 FUOMA2VDF0 154 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 GOLGA8OA6NCC3 632 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 C4orf47A7E2U8 309 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 EVPLLA8MZ36 301 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 HNRNPCL2B2RXH8 293 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 GOLGA8NF8WBI6 632 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 TMEM178BH3BS89 294 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 GOLGA8RI6L899 631 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 M0QX08 132 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 TO15178 435 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 KMOO15229 486 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 ZNHIT1O43257 154 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 DENRO43583 198 aaKnown RBP4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 LDB3O75112 727 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 GMNNO75496 209 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 TRUB2O95900 331 aaKnown RBP4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 OR52Z1P0C646 297 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 SNHG28P0DPA3 235 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 MCF2P10911 925 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 CCDC130P13994 396 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 ITGA2P17301 1181 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 PSMC3P17980 439 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 CASP1P29466 404 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 FDFT1P37268 417 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 RPL21P46778 160 aaKnown RBP4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 GSSP48637 474 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 THBS3P49746 956 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 PDLIM4P50479 330 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 HADHBP55084 474 aaKnown RBP4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 C21orf59P57076 290 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 ISL1P61371 349 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 ATP6V0D1P61421 351 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 POU5F1Q01860 360 aaKnown RBP4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 APOFQ13790 326 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 PTK6Q13882 451 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 GTF2H2Q13888 395 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 SPCS2Q15005 226 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 CYTH1Q15438 398 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms