RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 TACR2P21452 398 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 ZNF45Q02386 682 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 LRRC37A5PQ49AS3 106 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 SFRP4Q6FHJ7 346 aaPredicted RBP8.48□□□□□ -1.05
RTN4-206ENST00000394611 SERPINA13PQ6UXR4 307 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 WASH2PQ6VEQ5 465 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 FAM92BQ6ZTR7 304 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 GET4Q7L5D6 327 aaPredicted RBP8.48□□□□□ -1.05
RTN4-206ENST00000394611 ADGRD2Q7Z7M1 963 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 SLC30A8Q8IWU4 369 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 AADATQ8N5Z0 425 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 SLC9A7Q96T83 725 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 SLC35A5Q9BS91 424 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 SAP130Q9H0E3 1048 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 RHBGQ9H310 441 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 NUDT15Q9NV35 164 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 QPCTLQ9NXS2 382 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 SLC25A37Q9NYZ2 338 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 CMAHPQ9Y471 501 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 LOXHD1Q8IVV2 1947 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 TCRBV5S2A0A599 114 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 CENPBD1B2RD01 187 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 PIRO00625 290 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 ARHGAP33O14559 1287 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 PCDH7O60245 1069 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 PQBP1O60828 265 aaKnown RBP8.48□□□□□ -1.05
RTN4-206ENST00000394611 ESR1P03372 595 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 IFNW1P05000 195 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 MAGEA12P43365 314 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 MAP2K3P46734 347 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 OR3A3P47888 321 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 GTF2IRD2BQ6EKJ0 949 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 PNCKQ6P2M8 343 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 GTF2IRD2Q86UP8 949 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 MFSD4AQ8N468 514 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 SCAMP4Q969E2 229 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 TRMT61BQ9BVS5 477 aaKnown RBP8.48□□□□□ -1.05
RTN4-206ENST00000394611 SIRT5Q9NXA8 310 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 FBXO10Q9UK96 956 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 PCDHGB3Q9Y5G1 929 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 SEC16AO15027 2179 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 GABRDO14764 452 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 ORC5O43913 435 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 HPGDSO60760 199 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 ENTPD6O75354 484 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 CSN2P05814 226 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 RHOQP17081 205 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 RPS19P39019 145 aaKnown RBP8.47□□□□□ -1.05
RTN4-206ENST00000394611 MANFP55145 182 aaKnown RBP8.47□□□□□ -1.05
RTN4-206ENST00000394611 CNTN1Q12860 1018 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 SCARB2Q14108 478 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 SPHARQ15513 63 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 VARS2Q5ST30 1063 aaKnown RBP8.47□□□□□ -1.05
RTN4-206ENST00000394611 PRSS55Q6UWB4 352 aaPredicted RBP8.47□□□□□ -1.05
RTN4-206ENST00000394611 DLEU7Q6UYE1 221 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 HACD2Q6Y1H2 254 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 PRSS48Q7RTY5 328 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 COLGALT2Q8IYK4 626 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 PGBD5Q8N414 524 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 MDGA1Q8NFP4 955 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 PPCDCQ96CD2 204 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 C8orf48Q96LL4 319 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 PPP1R2P1Q96PQ5 205 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 TRIM62Q9BVG3 475 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 DERL2Q9GZP9 239 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 SLIRPQ9GZT3 109 aaKnown RBP8.47□□□□□ -1.05
RTN4-206ENST00000394611 ABCG5Q9H222 651 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 ZDHHC4Q9NPG8 344 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 DCAF13Q9NV06 445 aaKnown RBP8.47□□□□□ -1.05
RTN4-206ENST00000394611 ABCD2Q9UBJ2 740 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 EXTL2Q9UBQ6 330 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 IGKV6-21A0A0C4DH24 114 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 GLYATL1P3A0A0U1RQE8 302 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 BMP1P13497 986 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 CYP2A7P20853 494 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 CORO1AP31146 461 aaKnown RBP8.47□□□□□ -1.05
RTN4-206ENST00000394611 PPP2R2BQ00005 443 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 FOXM1Q08050 763 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 MAB21L1Q13394 359 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 CDK10Q15131 360 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 IFI44LQ53G44 452 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 CRB2Q5IJ48 1285 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 SAMD12Q8N8I0 201 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 LKAAEAR1Q8TD35 194 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 PTCD2Q8WV60 388 aaKnown RBP8.47□□□□□ -1.05
RTN4-206ENST00000394611 RAD51AP1Q96B01 352 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 L3HYPDHQ96EM0 354 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 FNDC11Q9BVV2 318 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 MKRN2Q9H000 416 aaKnown RBP8.47□□□□□ -1.05
RTN4-206ENST00000394611 ZNF225Q9UK10 706 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 PLAGL1Q9UM63 463 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 MGAT4BQ9UQ53 548 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 POLHQ9Y253 713 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 B3GNT3Q9Y2A9 372 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 WDR87Q6ZQQ6 2873 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 COL1A2P08123 1366 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 FXYD6-FXYD2A0A087WZ82 144 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 METTL15A6NJ78 407 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 CCDC85CA6NKD9 419 aa8.47□□□□□ -1.05
RTN4-206ENST00000394611 CLCA1A8K7I4 914 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms