RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 LRRC20Q8TCA0 184 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 WACQ9BTA9 647 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 OR2B2Q9GZK3 357 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 ERVK13-1Q9NX77 482 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 NOTOA8MTQ0 251 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 LEFTY2O00292 366 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 IL3P08700 152 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 C1GALT1C1LP0DN25 315 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 ITGAMP11215 1152 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 ETV3P41162 512 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 FAM189BP81408 668 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 ZNF691Q5VV52 312 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 ERMAPQ96PL5 475 aaPredicted RBP16.75■□□□□ 0.27
PTPRU-202ENST00000373779 CCDC32Q9BV29 185 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 PLAGL1Q9UM63 463 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 PCDHGB1Q9Y5G3 927 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 UBFD1O14562 309 aaKnown RBP16.75■□□□□ 0.27
PTPRU-202ENST00000373779 ZNF195O14628 629 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 DSG2Q14126 1118 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 SELPLGQ14242 412 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 LRRTM4Q86VH4 590 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 OR14C36Q8NHC7 312 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 ZNF563Q8TA94 476 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 LMLNQ96KR4 655 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 TRIM36Q9NQ86 728 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 SACM1LQ9NTJ5 587 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 PPP2R2BQ00005 443 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 EMX1Q04741 257 aaPredicted RBP16.75■□□□□ 0.27
PTPRU-202ENST00000373779 SPHARQ15513 63 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 ZNF648Q5T619 568 aaPredicted RBP16.75■□□□□ 0.27
PTPRU-202ENST00000373779 TOMM5Q8N4H5 51 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 OR5P2Q8WZ92 322 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 MAL2Q969L2 176 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 A0A0U1RQS6 177 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 B3GALT2O43825 422 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 SPCS2Q15005 226 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 ATAT1Q5SQI0 421 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 C11orf84Q9BUA3 381 aaPredicted RBP16.75■□□□□ 0.27
PTPRU-202ENST00000373779 PDCD5O14737 125 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 UPK1BO75841 260 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 ECDO95905 644 aaPredicted RBP16.75■□□□□ 0.27
PTPRU-202ENST00000373779 ETFAP13804 333 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 TYRP14679 529 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 DDX6P26196 483 aaKnown RBP eCLIP16.75■□□□□ 0.272e-7■■■■■ 40.2
PTPRU-202ENST00000373779 RTP2Q5QGT7 225 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 PRPF38BQ5VTL8 546 aaKnown RBP16.75■□□□□ 0.27
PTPRU-202ENST00000373779 PAMR1Q6UXH9 720 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 DPY19L3Q6ZPD9 716 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 TRAM1L1Q8N609 369 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 OR56A1Q8NGH5 318 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 AHCYL2Q96HN2 611 aaKnown RBP16.75■□□□□ 0.27
PTPRU-202ENST00000373779 SLC12A9Q9BXP2 914 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 USP22Q9UPT9 525 aa16.75■□□□□ 0.27
PTPRU-202ENST00000373779 PEPDP12955 493 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 ACP5P13686 325 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 ACVR2AP27037 513 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 ARFIP1P53367 373 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 RHAGQ02094 409 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 GPR149Q86SP6 731 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 OR8J1Q8NGP2 316 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 DPAGT1Q9H3H5 408 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 NUMBLQ9Y6R0 609 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 GJB3O75712 270 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 GSRP00390 522 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 SOD2P04179 222 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 LRRC32Q14392 662 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 LDLRAD1Q5T700 205 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 SLC30A6Q6NXT4 461 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 HUS1BQ8NHY5 278 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 GPR151Q8TDV0 419 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 ADAP2Q9NPF8 381 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 TPD52L2O43399 206 aaKnown RBP16.74■□□□□ 0.27
PTPRU-202ENST00000373779 AGR2O95994 175 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 CLCNKAP51800 687 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 AFF1P51825 1210 aaKnown RBP16.74■□□□□ 0.27
PTPRU-202ENST00000373779 MAD2L1BPQ15013 274 aaPredicted RBP16.74■□□□□ 0.27
PTPRU-202ENST00000373779 DEFB115Q30KQ5 88 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 METTL2BQ6P1Q9 378 aaKnown RBP16.74■□□□□ 0.27
PTPRU-202ENST00000373779 TSPAN33Q86UF1 283 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 DCUN1D3Q8IWE4 304 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 TSEN15Q8WW01 171 aaKnown RBP16.74■□□□□ 0.27
PTPRU-202ENST00000373779 NR4A3Q92570 626 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 TTYH1Q9H313 450 aaPredicted RBP16.74■□□□□ 0.27
PTPRU-202ENST00000373779 GLI3P10071 1580 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 EIF3FO00303 357 aaPredicted RBP16.74■□□□□ 0.27
PTPRU-202ENST00000373779 MID1O15344 667 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 NDUFS4O43181 175 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 PCSK6P29122 969 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 GBX2P52951 348 aaPredicted RBP16.74■□□□□ 0.27
PTPRU-202ENST00000373779 ADGRD2Q7Z7M1 963 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 NFKBIL1Q9UBC1 381 aaPredicted RBP16.74■□□□□ 0.27
PTPRU-202ENST00000373779 ACSL6Q9UKU0 697 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 STUB1Q9UNE7 303 aa16.74■□□□□ 0.27
PTPRU-202ENST00000373779 SCAMP1O15126 338 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 ZXDBP98169 803 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 FUNDC1Q8IVP5 155 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 APCDD1Q8J025 514 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 GNPDA2Q8TDQ7 276 aa16.73■□□□□ 0.27
PTPRU-202ENST00000373779 SMG9Q9H0W8 520 aaKnown RBP16.73■□□□□ 0.27
PTPRU-202ENST00000373779 ZBTB20Q9HC78 741 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms