RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 SEC23BQ15437 767 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.69□□□□□ -0.22
COL1A2-201ENST00000297268 BRAT1Q6PJG6 821 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 ISCA2Q86U28 154 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 TSPYL5Q86VY4 417 aaPredicted RBP13.69□□□□□ -0.22
COL1A2-201ENST00000297268 SHKBP1Q8TBC3 707 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 HAPLN2Q9GZV7 340 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 C8orf89P0DMQ9 161 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 VAMP1P23763 118 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 ARSDP51689 593 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 GALNT1Q10472 559 aaPredicted RBP13.69□□□□□ -0.22
COL1A2-201ENST00000297268 KCNC3Q14003 757 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 GK3PQ14409 553 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 Q6ZVU0 165 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 ZNF227Q86WZ6 799 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 TMEM151AQ8N4L1 468 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 OR56A1Q8NGH5 318 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 PCDHB11Q9Y5F2 797 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 NALCNQ8IZF0 1738 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 H7C2Y5 167 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 OXSR1O95747 527 aaPredicted RBP13.69□□□□□ -0.22
COL1A2-201ENST00000297268 ACP5P13686 325 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 PTNP21246 168 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 CD40LGP29965 261 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 SLC25A25Q6KCM7 469 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 TMCO2Q7Z6W1 182 aaPredicted RBP13.69□□□□□ -0.22
COL1A2-201ENST00000297268 DTX3Q8N9I9 347 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 PSD4Q8NDX1 1056 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 TTTY10Q9BZA0 68 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 METTL8Q9H825 291 aaKnown RBP13.69□□□□□ -0.22
COL1A2-201ENST00000297268 CD93Q9NPY3 652 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 FSHRP23945 695 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 DNASE1P24855 282 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 FNTBP49356 437 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 ILF3Q12906 894 aaKnown RBP eCLIP13.69□□□□□ -0.22
COL1A2-201ENST00000297268 NFATC2Q13469 925 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 NPWQ8N729 165 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 FBXO15Q8NCQ5 510 aaPredicted RBP13.69□□□□□ -0.22
COL1A2-201ENST00000297268 SH3RF2Q8TEC5 729 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 ACOT12Q8WYK0 555 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 NR4A3Q92570 626 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 NELL2Q99435 816 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 NLGN3Q9NZ94 848 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 MGAT4AQ9UM21 535 aa13.69□□□□□ -0.22
COL1A2-201ENST00000297268 HTR3EA5X5Y0 456 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 PREPP48147 710 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 LIPJQ5W064 366 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 HMBOX1Q6NT76 420 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 BORAQ6PGQ7 559 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 OR8J1Q8NGP2 316 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 OR5J2Q8NH18 312 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 KLK6Q92876 244 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 HEBP2Q9Y5Z4 205 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 H3BSH0 61 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 POP7O75817 140 aaKnown RBP13.68□□□□□ -0.22
COL1A2-201ENST00000297268 OXTRP30559 389 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 ARFRP1Q13795 201 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 SLC27A4Q6P1M0 643 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 SUSD1Q6UWL2 747 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 GPRIN1Q7Z2K8 1008 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 VTCN1Q7Z7D3 282 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 UMODL1-AS1Q8N2C9 162 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 GATAD2BQ8WXI9 593 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 PMEPA1Q969W9 287 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 DPCDQ9BVM2 203 aaPredicted RBP13.68□□□□□ -0.22
COL1A2-201ENST00000297268 ENPP5Q9UJA9 477 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 RIMS3Q9UJD0 308 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 YIPF1Q9Y548 306 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 ARFGEF2Q9Y6D5 1785 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 LOC100509620A0A075B734 347 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 A0A0U1RQF3 1178 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 UPK3BL1B0FP48 263 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 UPK3BL2E5RIL1 263 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 SNAPC5O75971 98 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 TOXO94900 526 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 GNAO1P09471 354 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 MAT2AP31153 395 aaKnown RBP13.68□□□□□ -0.22
COL1A2-201ENST00000297268 HOXD12P35452 270 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 BTN3A2P78410 334 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 MEF2AQ02078 507 aaPredicted RBP13.68□□□□□ -0.22
COL1A2-201ENST00000297268 PRKCDQ05655 676 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 HSD17B12Q53GQ0 312 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 PSAPL1Q6NUJ1 521 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 NUP54Q7Z3B4 507 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 LHFPL3Q86UP9 236 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 TMEM145Q8NBT3 493 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 JPH3Q8WXH2 748 aaPredicted RBP13.68□□□□□ -0.22
COL1A2-201ENST00000297268 SLC25A36Q96CQ1 311 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 FEVQ99581 238 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 SLC30A3Q99726 388 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 CHMP1AQ9HD42 196 aaPredicted RBP13.68□□□□□ -0.22
COL1A2-201ENST00000297268 MYH7P12883 1935 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 AOC2O75106 756 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 UPK1BO75841 260 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 LCKP06239 509 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 CLDN10P78369 228 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 FAM76BQ5HYJ3 339 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 PAGE3Q5JUK9 113 aa13.68□□□□□ -0.22
COL1A2-201ENST00000297268 EIF5AL1Q6IS14 154 aaKnown RBP13.68□□□□□ -0.22
COL1A2-201ENST00000297268 SLC7A5P1Q8MH63 180 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms