RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 TIFABQ6ZNK6 161 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 C15orf52Q6ZUT6 534 aaKnown RBP0.73□□□□□ -2.29
CEP290-208ENST00000604024 ANKRD33Q7Z3H0 272 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 DND1Q8IYX4 353 aaKnown RBP0.73□□□□□ -2.29
CEP290-208ENST00000604024 FBXO39Q8N4B4 442 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 NTNG2Q96CW9 530 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 STARD4Q96DR4 205 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 SLC26A6Q9BXS9 759 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 NOL11Q9H8H0 719 aaKnown RBP0.73□□□□□ -2.29
CEP290-208ENST00000604024 VIPAS39Q9H9C1 493 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 TBC1D17Q9HA65 648 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 CIDEBQ9UHD4 219 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 CPSF3Q9UKF6 684 aaKnown RBP0.73□□□□□ -2.29
CEP290-208ENST00000604024 CCPG1Q9ULG6 757 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 MOKQ9UQ07 419 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 PTPRMP28827 1452 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 PLB1Q6P1J6 1458 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 MAGI1Q96QZ7 1491 aaPredicted RBP0.73□□□□□ -2.29
CEP290-208ENST00000604024 RALGAPA1Q6GYQ0 2036 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 EPPK1P58107 5090 aaKnown RBP0.73□□□□□ -2.29
CEP290-208ENST00000604024 CFAP43Q8NDM7 1665 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 TRBV5-4A0A0C4DH59 114 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 LRCOL1A6NCL2 159 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 IGLON5A6NGN9 336 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 TMEM150CB9EJG8 249 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 PRSS46E5RG02 174 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 LMO7DNF2Z398 122 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 TSC22D2O75157 780 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 RHBDL1O75783 438 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 EIF3JO75822 258 aaKnown RBP0.73□□□□□ -2.29
CEP290-208ENST00000604024 TSPAN9O75954 239 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 SAT1P21673 171 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 CHRNA3P32297 505 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 RBMXP38159 391 aaKnown RBP0.73□□□□□ -2.29
CEP290-208ENST00000604024 GARSP41250 739 aaKnown RBP0.73□□□□□ -2.29
CEP290-208ENST00000604024 MATR3P43243 847 aaKnown RBP eCLIP0.73□□□□□ -2.29
CEP290-208ENST00000604024 PPA1Q15181 289 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 RFTN2Q52LD8 501 aaPredicted RBP0.73□□□□□ -2.29
CEP290-208ENST00000604024 RFWD3Q6PCD5 774 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 DHRS11Q6UWP2 260 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 TEX26Q8N6G2 289 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 C14orf178Q8N769 122 aaPredicted RBP0.73□□□□□ -2.29
CEP290-208ENST00000604024 OR4C15Q8NGM1 316 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 OR4Q3Q8NH05 313 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 ZNF564Q8TBZ8 553 aaPredicted RBP0.73□□□□□ -2.29
CEP290-208ENST00000604024 GTSF1Q8WW33 167 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 SERINC2Q96SA4 455 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 MYNNQ9NPC7 610 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 OLA1Q9NTK5 396 aaKnown RBP0.73□□□□□ -2.29
CEP290-208ENST00000604024 KLHL21Q9UJP4 597 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 AGTPBP1Q9UPW5 1226 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 NIP7Q9Y221 180 aaKnown RBP eCLIP0.73□□□□□ -2.29
CEP290-208ENST00000604024 RPS6KL1Q9Y6S9 549 aa0.73□□□□□ -2.29
CEP290-208ENST00000604024 ITIH6Q6UXX5 1313 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 SALL1Q9NSC2 1324 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 ATAD2BQ9ULI0 1458 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 CAMTA1Q9Y6Y1 1673 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 GLOD5A6NK44 160 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 B4DXG7 233 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 MAGEB2O15479 319 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 PTP4A3O75365 173 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 CD22P20273 847 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 MPZP25189 248 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 GDF1P27539 372 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 NRIP1P48552 1158 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 NT5C2P49902 561 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 STAT2P52630 851 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 EFNA3P52797 238 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 LINC00315P59091 139 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 C1QTNF8P60827 252 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 DDX10Q13206 875 aaKnown RBP0.72□□□□□ -2.29
CEP290-208ENST00000604024 EBI3Q14213 229 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 MPPED2Q15777 294 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 AGBL2Q5U5Z8 902 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 NAA16Q6N069 864 aaPredicted RBP0.72□□□□□ -2.29
CEP290-208ENST00000604024 MMS22LQ6ZRQ5 1243 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 NUFIP2Q7Z417 695 aaKnown RBP0.72□□□□□ -2.29
CEP290-208ENST00000604024 COX8CQ7Z4L0 72 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 TBC1D10CQ8IV04 446 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 OR6T1Q8NGN1 323 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 OR13F1Q8NGS4 319 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 PRPF31Q8WWY3 499 aaKnown RBP0.72□□□□□ -2.29
CEP290-208ENST00000604024 ZNF622Q969S3 477 aaKnown RBP eCLIP0.72□□□□□ -2.292e-6■■■□□ 18.5
CEP290-208ENST00000604024 RNF121Q9H920 327 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 EIF2B3Q9NR50 452 aaKnown RBP0.72□□□□□ -2.29
CEP290-208ENST00000604024 IARS2Q9NSE4 1012 aaKnown RBP0.72□□□□□ -2.29
CEP290-208ENST00000604024 TBC1D7Q9P0N9 293 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 SLC12A6Q9UHW9 1150 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 HBS1LQ9Y450 684 aaKnown RBP0.72□□□□□ -2.29
CEP290-208ENST00000604024 ZFP37Q9Y6Q3 630 aaPredicted RBP0.72□□□□□ -2.29
CEP290-208ENST00000604024 PASKQ96RG2 1323 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 EPRSP07814 1512 aaKnown RBP0.72□□□□□ -2.29
CEP290-208ENST00000604024 CPS1P31327 1500 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 DIP2BQ9P265 1576 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 KIF13AQ9H1H9 1805 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 IGLV3-16A0A075B6K0 115 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 KIR2DL5BA0A0G2JN68 375 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 KIR2DL5BA0A0G2JPC4 375 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 A0A1W2PQ67 120 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 SERPINE3A8MV23 424 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms