RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 ARFIP1P53367 373 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 PLA2G16P53816 162 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 MTTPP55157 894 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 RHAGQ02094 409 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 EEF1A2Q05639 463 aaKnown RBP15.48■□□□□ 0.07
DNMT1-229ENST00000593049 AGAP7PQ5VUJ5 663 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 JMJD6Q6NYC1 403 aaPredicted RBP15.48■□□□□ 0.07
DNMT1-229ENST00000593049 ABHD17CQ6PCB6 329 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 QSOX2Q6ZRP7 698 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 CPEB2Q7Z5Q1 589 aaKnown RBP15.48■□□□□ 0.07
DNMT1-229ENST00000593049 SLC22A9Q8IVM8 553 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 PARP9Q8IXQ6 854 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 RIBC1Q8N443 379 aaPredicted RBP15.48■□□□□ 0.07
DNMT1-229ENST00000593049 ARMC2Q8NEN0 867 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 MZB1Q8WU39 189 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 THOC3Q96J01 351 aaKnown RBP15.48■□□□□ 0.07
DNMT1-229ENST00000593049 AGAP4Q96P64 663 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 TBCDQ9BTW9 1192 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 NTMT1Q9BV86 223 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 C1QTNF3Q9BXJ4 246 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 MS4A8Q9BY19 250 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 AICDAQ9GZX7 198 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 ZNF552Q9H707 407 aaPredicted RBP15.48■□□□□ 0.07
DNMT1-229ENST00000593049 ZNF160Q9HCG1 818 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 LANCL2Q9NS86 450 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 PSD3Q9NYI0 1048 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 PCTPQ9UKL6 214 aa15.48■□□□□ 0.07
DNMT1-229ENST00000593049 MRPS33Q9Y291 106 aaKnown RBP15.48■□□□□ 0.07
DNMT1-229ENST00000593049 A8MT66 165 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 K7EM74 188 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 PRMT3O60678 531 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 GLRA3O75311 464 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 B3GALT4O96024 378 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 OTCP00480 354 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 PDGFAP04085 211 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 SERPINA7P05543 415 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 RPS17P08708 135 aaKnown RBP15.47■□□□□ 0.07
DNMT1-229ENST00000593049 NUDT17P0C025 328 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 ATP5F1P24539 256 aaPredicted RBP15.47■□□□□ 0.07
DNMT1-229ENST00000593049 ARL1P40616 181 aaPredicted RBP15.47■□□□□ 0.07
DNMT1-229ENST00000593049 TSFMP43897 325 aaKnown RBP15.47■□□□□ 0.07
DNMT1-229ENST00000593049 SLCO1A2P46721 670 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 CCT5P48643 541 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 OLR1P78380 273 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 RAPSNQ13702 412 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 ABRAXAS2Q15018 415 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 PCOLCEQ15113 449 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 NSDHLQ15738 373 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 IGFL3Q6UXB1 125 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 ANKRD37Q7Z713 158 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 CA13Q8N1Q1 262 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 TMEM151AQ8N4L1 468 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 AENQ8WTP8 325 aaKnown RBP15.47■□□□□ 0.07
DNMT1-229ENST00000593049 CAVIN3Q969G5 261 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 CCDC126Q96EE4 140 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 QRFPRQ96P65 431 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 NOL11Q9H8H0 719 aaKnown RBP15.47■□□□□ 0.07
DNMT1-229ENST00000593049 TMEM216Q9P0N5 145 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 MMACHCQ9Y4U1 282 aa15.47■□□□□ 0.07
DNMT1-229ENST00000593049 TNRC6AQ8NDV7 1962 aaKnown RBP15.47■□□□□ 0.07
DNMT1-229ENST00000593049 C4orf51C9J302 202 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 GOLGA8RI6L899 631 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 FOXE1O00358 373 aaPredicted RBP15.46■□□□□ 0.07
DNMT1-229ENST00000593049 CLDN4O14493 209 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 OR7A17O14581 309 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 B4GALT2O60909 372 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 CDC123O75794 336 aaPredicted RBP15.46■□□□□ 0.07
DNMT1-229ENST00000593049 TBX6O95947 436 aaPredicted RBP15.46■□□□□ 0.07
DNMT1-229ENST00000593049 PRR35P0CG20 571 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 PTX3P26022 381 aaPredicted RBP15.46■□□□□ 0.07
DNMT1-229ENST00000593049 RAB38P57729 211 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 HERVK_113P63132 956 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 ACTN3Q08043 901 aaPredicted RBP15.46■□□□□ 0.07
DNMT1-229ENST00000593049 IFFO1Q0D2I5 559 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 EXT1Q16394 746 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 CPSF6Q16630 551 aaKnown RBP eCLIP15.46■□□□□ 0.07
DNMT1-229ENST00000593049 AP5B1Q2VPB7 878 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 CCDC153Q494R4 210 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 DEPDC1Q5TB30 811 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 KHDRBS2Q5VWX1 349 aaKnown RBP15.46■□□□□ 0.07
DNMT1-229ENST00000593049 PLAG1Q6DJT9 500 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 ZADH2Q8N4Q0 377 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 C7orf57Q8NEG2 295 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 MYRIPQ8NFW9 859 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 HUS1BQ8NHY5 278 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 EPS8L3Q8TE67 593 aaKnown RBP15.46■□□□□ 0.07
DNMT1-229ENST00000593049 PPP4R1Q8TF05 950 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 ZNF483Q8TF39 744 aaPredicted RBP15.46■□□□□ 0.07
DNMT1-229ENST00000593049 F2RL3Q96RI0 385 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 ERVK-6Q9BXR3 956 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 RBCK1Q9BYM8 510 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 ROPN1BQ9BZX4 212 aaPredicted RBP15.46■□□□□ 0.07
DNMT1-229ENST00000593049 EPS8L2Q9H6S3 715 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 ROPN1Q9HAT0 212 aaPredicted RBP15.46■□□□□ 0.07
DNMT1-229ENST00000593049 LYRM4Q9HD34 91 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 DMRT3Q9NQL9 472 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 PRDM9Q9NQV7 894 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 PRDM7Q9NQW5 492 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 PPT2Q9UMR5 302 aa15.46■□□□□ 0.07
DNMT1-229ENST00000593049 STK38LQ9Y2H1 464 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms