RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 SLC7A4O43246 635 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 SLC22A3O75751 556 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 SEC14L2O76054 403 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ARP10275 920 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 PKMP14618 531 aaKnown RBP8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 PAX6P26367 422 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ARSFP54793 590 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 RAB8AP61006 207 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 CTBP1Q13363 440 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 CERS6Q6ZMG9 384 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ZNF621Q6ZSS3 439 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 FAM131BQ86XD5 332 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 CDK20Q8IZL9 346 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 SPATA22Q8NHS9 363 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ZNF606Q8WXB4 792 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 TIFAQ96CG3 184 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ABCG5Q9H222 651 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ACTR8Q9H981 624 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 DKKL1Q9UK85 242 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 USP18Q9UMW8 372 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ANGPT4Q9Y264 503 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 WDR45Q9Y484 360 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 OAS3Q9Y6K5 1087 aaKnown RBP8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 GCATO75600 419 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 IRS1P35568 1242 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 RENBPP51606 427 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 CDH8P55286 799 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 BMT2Q1RMZ1 405 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 LPCAT3Q6P1A2 487 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 THNSL2Q86YJ6 484 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ZBTB8OSQ8IWT0 167 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ZNF675Q8TD23 568 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 TAAR8Q969N4 342 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 METTL9Q9H1A3 318 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 OR51J1Q9H342 316 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 TM9SF3Q9HD45 589 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ACSS1Q9NUB1 689 aaPredicted RBP8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 HSBP1L1C9JCN9 74 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 F5H0A9 414 aaPredicted RBP8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 CLDN4O14493 209 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 MT-CYBP00156 380 aaPredicted RBP8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 CSN2P05814 226 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 CPOXP36551 454 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 VLDLRP98155 873 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 GPR149Q86SP6 731 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 TMEM130Q8N3G9 435 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 PXT1Q8NFP0 134 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 SLC35C1Q96A29 364 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 FAM120CQ9NX05 1096 aaKnown RBP8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 TRIM77I1YAP6 450 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 LALBAP00709 142 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 FABP4P15090 132 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 CCR7P32248 378 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ATP5C1P36542 298 aaKnown RBP8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 PURAQ00577 322 aaKnown RBP8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ARL6IP1Q15041 203 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 SMAD2Q15796 467 aaKnown RBP8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 Q5BKY6 102 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ZNF667Q5HYK9 610 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 EFHC2Q5JST6 749 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 FAM46CQ5VWP2 391 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ZDHHC20Q5W0Z9 365 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 TMPRSS7Q7RTY8 843 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 LAX1Q8IWV1 398 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 TSTD1Q8NFU3 115 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ELP5Q8TE02 316 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 HMGB4Q8WW32 186 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 AAASQ9NRG9 546 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 LUZP4Q9P127 313 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 MYH11P35749 1972 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ABHD14A-ACY1A0A1B0GW23 586 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 LOC390937A0A1W2PQ73 354 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 A0A1W2PQL4 384 aaPredicted RBP8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 C5orf51A6NDU8 294 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 D6RAR5 112 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ADAMTS3O15072 1205 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 CHRM3P20309 590 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 DPPA4Q7L190 304 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 CHDHQ8NE62 594 aaPredicted RBP8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 WDR48Q8TAF3 677 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ACE2Q9BYF1 805 aaPredicted RBP8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 TMPRSS5Q9H3S3 457 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 CLN6Q9NWW5 311 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 KLHL21Q9UJP4 597 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 ICKQ9UPZ9 632 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 RAP2CQ9Y3L5 183 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 TNRQ92752 1358 aa8.7□□□□□ -1.02
GTF2A1-203ENST00000553612 TMEM235A6NFC5 223 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 BTNL10A8MVZ5 291 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 CHP2O43745 196 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 ACVR2AP27037 513 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 CRABP1P29762 137 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 BIDP55957 195 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 HOXC5Q00444 222 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 RBBP4Q09028 425 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 VAMP3Q15836 100 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 NTRK2Q16620 822 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 LRRTM4Q86VH4 590 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 HDDC3Q8N4P3 179 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms