RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 PTPMT1Q8WUK0 201 aaPredicted RBP0.37□□□□□ -2.35
COPB1-212ENST00000534771 DEDD2Q8WXF8 326 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 USP6NLQ92738 828 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 PROX1Q92786 737 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 TADA1Q96BN2 335 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 MOB3AQ96BX8 217 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 NXNL1Q96CM4 212 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 NTNG2Q96CW9 530 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 PGM2Q96G03 612 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 VSIG2Q96IQ7 327 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 MPP4Q96JB8 637 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 OR5M11Q96RB7 305 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 NDNQ99608 321 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 ARPC5LQ9BPX5 153 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 ZNF670Q9BS34 389 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 PINK1Q9BXM7 581 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 SLC2A11Q9BYW1 496 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 FTOQ9C0B1 505 aaKnown RBP eCLIP0.37□□□□□ -2.353e-14■□□□□ 8.6
COPB1-212ENST00000534771 NMUR2Q9GZQ4 415 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 VCXQ9H320 206 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 RIMS4Q9H426 269 aaPredicted RBP0.37□□□□□ -2.35
COPB1-212ENST00000534771 C10orf88Q9H8K7 445 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 CDH20Q9HBT6 801 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 HPS4Q9NQG7 708 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 SLC35C2Q9NQQ7 365 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 ZNF331Q9NQX6 463 aaPredicted RBP0.37□□□□□ -2.35
COPB1-212ENST00000534771 SH3GLB2Q9NR46 395 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 INPP5EQ9NRR6 644 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 SATB2Q9UPW6 733 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 LRRFIP2Q9Y608 721 aaKnown RBP0.37□□□□□ -2.35
COPB1-212ENST00000534771 GON4LQ3T8J9 2241 aa0.37□□□□□ -2.35
COPB1-212ENST00000534771 TDRD9Q8NDG6 1382 aaKnown RBP0.36□□□□□ -2.35
COPB1-212ENST00000534771 GPR75-ASB3A0A0A6YYF3 556 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 A0A1B0GUA9 196 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 FSD2A1L4K1 749 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 OR2A25A4D2G3 310 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 MFSD2BA6NFX1 497 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 B4DXG7 233 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 LMO7DNF2Z398 122 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 MCF2LO15068 1137 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 NPHP1O15259 732 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 PAPSS1O43252 624 aaPredicted RBP0.36□□□□□ -2.35
COPB1-212ENST00000534771 FRAT2O75474 233 aaPredicted RBP0.36□□□□□ -2.35
COPB1-212ENST00000534771 ATP6AP2O75787 350 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 SERF1AO75920 110 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 TOXO94900 526 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 DUSP14O95147 198 aaKnown RBP0.36□□□□□ -2.35
COPB1-212ENST00000534771 STBD1O95210 358 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 PRAMEF12O95522 483 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 CD4P01730 458 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 IGKV4-1P06312 121 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 LAMP2P13473 410 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 GOT1P17174 413 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 PSMB1P20618 241 aaKnown RBP0.36□□□□□ -2.35
COPB1-212ENST00000534771 FUT3P21217 361 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 CCNE1P24864 410 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 CTNNA2P26232 953 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 PPP2R1AP30153 589 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 HTR1FP30939 366 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 LHX1P48742 406 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 ASCL1P50553 236 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 EFNA3P52797 238 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 CLDN15P56746 228 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 POLR2LP62875 67 aaKnown RBP0.36□□□□□ -2.35
COPB1-212ENST00000534771 RPS27AP62979 156 aaKnown RBP0.36□□□□□ -2.35
COPB1-212ENST00000534771 GSTO1P78417 241 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 ZNF45Q02386 682 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 CACNG1Q06432 222 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 ILF2Q12905 390 aaKnown RBP0.36□□□□□ -2.35
COPB1-212ENST00000534771 RALGDSQ12967 914 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 ORC2Q13416 577 aaPredicted RBP0.36□□□□□ -2.35
COPB1-212ENST00000534771 BIRC2Q13490 618 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 ASAH1Q13510 395 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 SF3A2Q15428 464 aaKnown RBP0.36□□□□□ -2.35
COPB1-212ENST00000534771 NPTX1Q15818 432 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 PPP1R3AQ16821 1122 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 PAN3Q58A45 887 aaKnown RBP0.36□□□□□ -2.35
COPB1-212ENST00000534771 TMEM211Q6ICI0 200 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 DHRS11Q6UWP2 260 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 ABRAXAS1Q6UWZ7 409 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 GCNT7Q6ZNI0 430 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 PLPPR4Q7Z2D5 763 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 TRMT11Q7Z4G4 463 aaKnown RBP0.36□□□□□ -2.35
COPB1-212ENST00000534771 PRSS35Q8N3Z0 413 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 GUF1Q8N442 669 aaKnown RBP0.36□□□□□ -2.35
COPB1-212ENST00000534771 TEX26Q8N6G2 289 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 SAMD12Q8N8I0 201 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 OR13F1Q8NGS4 319 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 PAFAH2Q99487 392 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 FEVQ99581 238 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 LIME1Q9H400 295 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 FNDC4Q9H6D8 234 aaPredicted RBP0.36□□□□□ -2.35
COPB1-212ENST00000534771 NANOGQ9H9S0 305 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 UBN1Q9NPG3 1134 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 TBC1D22BQ9NU19 505 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 EXOC1Q9NV70 894 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 IMPAD1Q9NX62 359 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 RCOR3Q9P2K3 495 aaPredicted RBP0.36□□□□□ -2.35
COPB1-212ENST00000534771 PRODH2Q9UF12 536 aa0.36□□□□□ -2.35
COPB1-212ENST00000534771 CPSF3Q9UKF6 684 aaKnown RBP0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms