RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 UBL4BQ8N7F7 174 aa11.67□□□□□ -0.54
DDX41-215ENST00000512431 PRELID2Q8N945 189 aa11.67□□□□□ -0.54
DDX41-215ENST00000512431 ZNF740Q8NDX6 193 aa11.67□□□□□ -0.54
DDX41-215ENST00000512431 ALG3Q92685 438 aa11.67□□□□□ -0.54
DDX41-215ENST00000512431 ALKBH8Q96BT7 664 aaKnown RBP11.67□□□□□ -0.54
DDX41-215ENST00000512431 YIPF4Q9BSR8 244 aa11.67□□□□□ -0.54
DDX41-215ENST00000512431 IL22Q9GZX6 179 aa11.67□□□□□ -0.54
DDX41-215ENST00000512431 RHBGQ9H310 441 aa11.67□□□□□ -0.54
DDX41-215ENST00000512431 PLEKHF2Q9H8W4 249 aa11.67□□□□□ -0.54
DDX41-215ENST00000512431 CLK4Q9HAZ1 481 aaKnown RBP11.67□□□□□ -0.54
DDX41-215ENST00000512431 NECTIN3Q9NQS3 549 aa11.67□□□□□ -0.54
DDX41-215ENST00000512431 LIPGQ9Y5X9 500 aa11.67□□□□□ -0.54
DDX41-215ENST00000512431 HEATR5BQ9P2D3 2071 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 SCN3AQ9NY46 2000 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 TRGV5A0A0B4J1U4 118 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 URADA6NGE7 173 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 AKR1B15C9JRZ8 316 aaPredicted RBP11.66□□□□□ -0.54
DDX41-215ENST00000512431 G3V3Y1 287 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 GFYI3L273 518 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 OR1F1O43749 312 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 HCN1O60741 890 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 DNAJB6O75190 326 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 OR2J2O76002 312 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 GLSO94925 669 aaPredicted RBP11.66□□□□□ -0.54
DDX41-215ENST00000512431 RNH1P13489 461 aaKnown RBP11.66□□□□□ -0.54
DDX41-215ENST00000512431 ENO3P13929 434 aaPredicted RBP11.66□□□□□ -0.54
DDX41-215ENST00000512431 CCND1P24385 295 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 NPY2RP49146 381 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 CRADDP78560 199 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 RGS1Q08116 209 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 TERF2Q15554 542 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 PHKG1Q16816 387 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 FAM47EQ6ZV65 393 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 SH3GL2Q99962 352 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 BDH2Q9BUT1 245 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 CNPPD1Q9BV87 410 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 CCDC68Q9H2F9 335 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 PNO1Q9NRX1 252 aaKnown RBP11.66□□□□□ -0.54
DDX41-215ENST00000512431 BFARQ9NZS9 450 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 ZFATQ9P243 1243 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.66□□□□□ -0.54
DDX41-215ENST00000512431 VPS13CQ709C8 3753 aa11.66□□□□□ -0.54
DDX41-215ENST00000512431 IGKV3D-11A0A0A0MRZ8 115 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 SYCE3A1L190 88 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 GOLGA8KD6RF30 607 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 GOLGA8TH3BQL2 631 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 P04436 131 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 ZNF888P0CJ79 500 aaPredicted RBP11.65□□□□□ -0.54
DDX41-215ENST00000512431 CDH1P12830 882 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 CD53P19397 219 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 OGNP20774 298 aaKnown RBP11.65□□□□□ -0.54
DDX41-215ENST00000512431 CCR8P51685 355 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 CLCN7P51798 805 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 KLF1Q13351 362 aaPredicted RBP11.65□□□□□ -0.54
DDX41-215ENST00000512431 CUL1Q13616 776 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 FBXL19-AS1Q494R0 122 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 RTL4Q6ZR62 310 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 MAATS1Q7Z4T9 603 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 VSTM4Q8IW00 320 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 PALM2Q8IXS6 379 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 FBXW8Q8N3Y1 598 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 RELL2Q8NC24 303 aaPredicted RBP11.65□□□□□ -0.54
DDX41-215ENST00000512431 NCLNQ969V3 563 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 PDLIM2Q96JY6 352 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 COX4I2Q96KJ9 171 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 HAUS8Q9BT25 410 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 SACM1LQ9NTJ5 587 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 KLHL42Q9P2K6 505 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 MYOTQ9UBF9 498 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 ZNF629Q9UEG4 869 aaPredicted RBP11.65□□□□□ -0.54
DDX41-215ENST00000512431 ZNF148Q9UQR1 794 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 MMACHCQ9Y4U1 282 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 PCDHGB3Q9Y5G1 929 aa11.65□□□□□ -0.54
DDX41-215ENST00000512431 CLCA1A8K7I4 914 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 H7C1Q1 480 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 SMAD7O15105 426 aaKnown RBP11.64□□□□□ -0.55
DDX41-215ENST00000512431 OR6B1O95007 311 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 B3GALT4O96024 378 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 IL2RAP01589 272 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 CYLC1P35663 651 aaPredicted RBP11.64□□□□□ -0.55
DDX41-215ENST00000512431 SOX3P41225 446 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 BMPR2Q13873 1038 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 HYAL4Q2M3T9 481 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 ZNF750Q32MQ0 723 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 Q5PR19 223 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 CATSPEREQ5SY80 951 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 LCTLQ6UWM7 567 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 C16orf47Q6ZP98 133 aaPredicted RBP11.64□□□□□ -0.55
DDX41-215ENST00000512431 CAPN12Q6ZSI9 719 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 KRTAP1-3Q8IUG1 177 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 CCDC170Q8IYT3 715 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 CCDC89Q8N998 374 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 MFSD3Q96ES6 412 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 SGCZQ96LD1 299 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 LIN28AQ9H9Z2 209 aaKnown RBP11.64□□□□□ -0.55
DDX41-215ENST00000512431 INTS10Q9NVR2 710 aaKnown RBP11.64□□□□□ -0.55
DDX41-215ENST00000512431 PAK5Q9P286 719 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 AMFRQ9UKV5 643 aa11.64□□□□□ -0.55
DDX41-215ENST00000512431 PPIEQ9UNP9 301 aaKnown RBP11.64□□□□□ -0.55
DDX41-215ENST00000512431 AKAP6Q13023 2319 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms