RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 TCTE1Q5JU00 501 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 TMTC4Q5T4D3 741 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 NXNQ6DKJ4 435 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 FOXR1Q6PIV2 292 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 DHRS13Q6UX07 377 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 ZNF793Q6ZN11 406 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 ALYREFQ86V81 257 aaKnown RBP5.65□□□□□ -1.5
USP39-213ENST00000467885 BPHLQ86WA6 291 aaPredicted RBP5.65□□□□□ -1.5
USP39-213ENST00000467885 PDSS2Q86YH6 399 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 DTWD1Q8N5C7 304 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 TBC1D19Q8N5T2 526 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 C1orf52Q8N6N3 182 aaKnown RBP5.65□□□□□ -1.5
USP39-213ENST00000467885 CSNK1A1LQ8N752 337 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 ACOT4Q8N9L9 421 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 SLC38A9Q8NBW4 561 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 CCDC197Q8NCU1 140 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 PROKR1Q8TCW9 393 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 NETO1Q8TDF5 533 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 OR6C1Q96RD1 312 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 REXO4Q9GZR2 422 aaKnown RBP5.65□□□□□ -1.5
USP39-213ENST00000467885 NSRP1Q9H0G5 558 aaKnown RBP5.65□□□□□ -1.5
USP39-213ENST00000467885 AKIRIN1Q9H9L7 192 aaPredicted RBP5.65□□□□□ -1.5
USP39-213ENST00000467885 SDR39U1Q9NRG7 319 aaPredicted RBP5.65□□□□□ -1.5
USP39-213ENST00000467885 AIG1Q9NVV5 245 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 ASIC5Q9NY37 505 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 DLL3Q9NYJ7 618 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 AHSPQ9NZD4 102 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 ADAM29Q9UKF5 820 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 G3BP2Q9UN86 482 aaKnown RBP5.65□□□□□ -1.5
USP39-213ENST00000467885 ERVK-11Q9UQG0 969 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 WBP11Q9Y2W2 641 aaKnown RBP5.65□□□□□ -1.5
USP39-213ENST00000467885 TMEM184BQ9Y519 407 aaPredicted RBP5.65□□□□□ -1.5
USP39-213ENST00000467885 MYO15AQ9UKN7 3530 aa5.65□□□□□ -1.5
USP39-213ENST00000467885 ZNF292O60281 2723 aa5.65□□□□□ -1.51
USP39-213ENST00000467885 TMEM131Q92545 1883 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 A0A0A6YYD5 115 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 A0A0G2JN53 185 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 LOC100653049A0A140TA62 436 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 A0A1W2PR48 441 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 CCT8L1PA6NM43 557 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 E9PBE3 544 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 FAM227AF5H4B4 570 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 TMX2-CTNND1H3BSU7 103 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 AGRPO00253 132 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 CYR61O00622 381 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 FCHO1O14526 889 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 PGRMC2O15173 223 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 NDUFS4O43181 175 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 ERI3O43414 337 aaKnown RBP5.64□□□□□ -1.51
USP39-213ENST00000467885 HYAL3O43820 417 aaPredicted RBP5.64□□□□□ -1.51
USP39-213ENST00000467885 MAN1A2O60476 641 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 KLHL41O60662 606 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 GALR3O60755 368 aaPredicted RBP5.64□□□□□ -1.51
USP39-213ENST00000467885 CCDC22O60826 627 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 OR2B3O76000 313 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 KRT34O76011 436 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 SCELO95171 688 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 KCNK5O95279 499 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 TIAF1O95411 115 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 ANXA4P09525 319 aaPredicted RBP5.64□□□□□ -1.51
USP39-213ENST00000467885 ZNF888P0CJ79 500 aaPredicted RBP5.64□□□□□ -1.51
USP39-213ENST00000467885 PRPS2P11908 318 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 ACPPP15309 386 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 ALOX12P18054 663 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 SDC1P18827 310 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 HIST1H1TP22492 207 aaPredicted RBP5.64□□□□□ -1.51
USP39-213ENST00000467885 CSTF2P33240 577 aaKnown RBP eCLIP5.64□□□□□ -1.51
USP39-213ENST00000467885 ETV5P41161 510 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 TSFMP43897 325 aaKnown RBP5.64□□□□□ -1.51
USP39-213ENST00000467885 PPM1FP49593 454 aaPredicted RBP5.64□□□□□ -1.51
USP39-213ENST00000467885 ARL4DP49703 201 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 ATP4BP51164 291 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 STXBP1P61764 594 aaKnown RBP5.64□□□□□ -1.51
USP39-213ENST00000467885 SIM1P81133 766 aaPredicted RBP5.64□□□□□ -1.51
USP39-213ENST00000467885 MC1RQ01726 317 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 ACY1Q03154 408 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 KLF10Q13118 480 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 TARDBPQ13148 414 aaKnown RBP eCLIP5.64□□□□□ -1.51
USP39-213ENST00000467885 IL11RAQ14626 422 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 TLR1Q15399 786 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 NR6A1Q15406 480 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 GSTA3Q16772 222 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 IMPG1Q17R60 797 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 DEFB110Q30KQ9 67 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 CCDC157Q569K6 752 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 CCNYL2Q5T2Q4 361 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 PHF19Q5T6S3 580 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 GARNL3Q5VVW2 1013 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 FAM71E1Q6IPT2 247 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 PWWP2BQ6NUJ5 590 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 TLDC1Q6P9B6 456 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 PAOXQ6QHF9 649 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 CYP20A1Q6UW02 462 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 RBM44Q6ZP01 1051 aaKnown RBP5.64□□□□□ -1.51
USP39-213ENST00000467885 ACAD11Q709F0 780 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 MED25Q71SY5 747 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 PRSS41Q7RTY9 318 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 COMMD6Q7Z4G1 85 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 MARCH9Q86YJ5 346 aa5.64□□□□□ -1.51
USP39-213ENST00000467885 TREML1Q86YW5 311 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms