RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 POU4F1Q01851 419 aa19.69■□□□□ 0.74
VSX1-206ENST00000444511 TGFBIQ15582 683 aa19.69■□□□□ 0.74
VSX1-206ENST00000444511 C3AR1Q16581 482 aa19.69■□□□□ 0.74
VSX1-206ENST00000444511 ZNF468Q5VIY5 522 aaPredicted RBP19.69■□□□□ 0.74
VSX1-206ENST00000444511 KLHDC8AQ8IYD2 350 aa19.69■□□□□ 0.74
VSX1-206ENST00000444511 KRT78Q8N1N4 520 aa19.69■□□□□ 0.74
VSX1-206ENST00000444511 NFAM1Q8NET5 270 aaPredicted RBP19.69■□□□□ 0.74
VSX1-206ENST00000444511 CDKL2Q92772 493 aa19.69■□□□□ 0.74
VSX1-206ENST00000444511 TSPAN17Q96FV3 270 aa19.69■□□□□ 0.74
VSX1-206ENST00000444511 MCMBPQ9BTE3 642 aa19.69■□□□□ 0.74
VSX1-206ENST00000444511 CAPS2Q9BXY5 557 aa19.69■□□□□ 0.74
VSX1-206ENST00000444511 DERL2Q9GZP9 239 aa19.69■□□□□ 0.74
VSX1-206ENST00000444511 AICDAQ9GZX7 198 aa19.69■□□□□ 0.74
VSX1-206ENST00000444511 RUBCNLQ9H714 662 aa19.69■□□□□ 0.74
VSX1-206ENST00000444511 TINAGQ9UJW2 476 aa19.69■□□□□ 0.74
VSX1-206ENST00000444511 MMACHCQ9Y4U1 282 aa19.69■□□□□ 0.74
VSX1-206ENST00000444511 A0A088AWK7 358 aa19.68■□□□□ 0.74
VSX1-206ENST00000444511 A0A0G2JN53 185 aa19.68■□□□□ 0.74
VSX1-206ENST00000444511 FCHO1O14526 889 aa19.68■□□□□ 0.74
VSX1-206ENST00000444511 ERI3O43414 337 aaKnown RBP19.68■□□□□ 0.74
VSX1-206ENST00000444511 ZNF10P21506 573 aaPredicted RBP19.68■□□□□ 0.74
VSX1-206ENST00000444511 GSTM2P28161 218 aa19.68■□□□□ 0.74
VSX1-206ENST00000444511 CALCOCO2Q13137 446 aa19.68■□□□□ 0.74
VSX1-206ENST00000444511 SRRM1Q8IYB3 904 aaKnown RBP19.68■□□□□ 0.74
VSX1-206ENST00000444511 TCAIMQ8N3R3 496 aa19.68■□□□□ 0.74
VSX1-206ENST00000444511 SPATA6LQ8N4H0 392 aa19.68■□□□□ 0.74
VSX1-206ENST00000444511 TMEM125Q96AQ2 219 aa19.68■□□□□ 0.74
VSX1-206ENST00000444511 CNOT10Q9H9A5 744 aaKnown RBP19.68■□□□□ 0.74
VSX1-206ENST00000444511 CAB39LQ9H9S4 337 aa19.68■□□□□ 0.74
VSX1-206ENST00000444511 SMYD2Q9NRG4 433 aa19.68■□□□□ 0.74
VSX1-206ENST00000444511 WWOXQ9NZC7 414 aa19.68■□□□□ 0.74
VSX1-206ENST00000444511 MTO1Q9Y2Z2 717 aaKnown RBP19.68■□□□□ 0.74
VSX1-206ENST00000444511 NME2P1O60361 137 aa19.67■□□□□ 0.74
VSX1-206ENST00000444511 MYO1DO94832 1006 aa19.67■□□□□ 0.74
VSX1-206ENST00000444511 NME2P22392 152 aa19.67■□□□□ 0.74
VSX1-206ENST00000444511 GRNP28799 593 aaKnown RBP19.67■□□□□ 0.74
VSX1-206ENST00000444511 SSTR1P30872 391 aa19.67■□□□□ 0.74
VSX1-206ENST00000444511 HNRNPH1P31943 449 aaKnown RBP19.67■□□□□ 0.74
VSX1-206ENST00000444511 HPDP32754 393 aaPredicted RBP19.67■□□□□ 0.74
VSX1-206ENST00000444511 HLCSP50747 726 aa19.67■□□□□ 0.74
VSX1-206ENST00000444511 MRPS25P82663 173 aaKnown RBP19.67■□□□□ 0.74
VSX1-206ENST00000444511 CBLBQ13191 982 aa19.67■□□□□ 0.74
VSX1-206ENST00000444511 BNC2Q6ZN30 1099 aaPredicted RBP19.67■□□□□ 0.74
VSX1-206ENST00000444511 GPSM1Q86YR5 675 aa19.67■□□□□ 0.74
VSX1-206ENST00000444511 SPPL2CQ8IUH8 684 aa19.67■□□□□ 0.74
VSX1-206ENST00000444511 B3GNT7Q8NFL0 401 aa19.67■□□□□ 0.74
VSX1-206ENST00000444511 MS4A6EQ96DS6 147 aa19.67■□□□□ 0.74
VSX1-206ENST00000444511 SEC16BQ96JE7 1060 aa19.67■□□□□ 0.74
VSX1-206ENST00000444511 PDLIM2Q96JY6 352 aa19.67■□□□□ 0.74
VSX1-206ENST00000444511 NPLQ9BXD5 320 aaPredicted RBP19.67■□□□□ 0.74
VSX1-206ENST00000444511 DPH5Q9H2P9 285 aa19.67■□□□□ 0.74
VSX1-206ENST00000444511 SAYSD1Q9NPB0 183 aa19.67■□□□□ 0.74
VSX1-206ENST00000444511 GPRC5BQ9NZH0 403 aa19.67■□□□□ 0.74
VSX1-206ENST00000444511 ZNF835Q9Y2P0 537 aa19.67■□□□□ 0.74
VSX1-206ENST00000444511 TRBV11-1A0A0K0K1C0 115 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 LRIT2A6NDA9 550 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 ANKDD1BA6NHY2 528 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 CLDN4O14493 209 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 CLGNO14967 610 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 PHGDHO43175 533 aaKnown RBP19.66■□□□□ 0.74
VSX1-206ENST00000444511 ASNA1O43681 348 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 B3GALT2O43825 422 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 CCDC166P0CW27 439 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 PRF1P14222 555 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 ZNF24P17028 368 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 HTR1EP28566 365 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 TNFRSF8P28908 595 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 TRHRP34981 398 aaPredicted RBP19.66■□□□□ 0.74
VSX1-206ENST00000444511 CLCN2P51788 898 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 RUNX2Q13950 521 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 TERF2Q15554 542 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 XKRXQ6PP77 449 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 SIAH3Q8IW03 269 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 MCEMP1Q8IX19 187 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 GHDCQ8N2G8 530 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 SNX31Q8N9S9 440 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 ANP32BQ92688 251 aaKnown RBP19.66■□□□□ 0.74
VSX1-206ENST00000444511 TMEM79Q9BSE2 394 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 PITHD1Q9GZP4 211 aaPredicted RBP19.66■□□□□ 0.74
VSX1-206ENST00000444511 NT5DC2Q9H857 520 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 TRIM45Q9H8W5 580 aaPredicted RBP19.66■□□□□ 0.74
VSX1-206ENST00000444511 CHST11Q9NPF2 352 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 PRTFDC1Q9NRG1 225 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 PNO1Q9NRX1 252 aaKnown RBP19.66■□□□□ 0.74
VSX1-206ENST00000444511 DNAJC11Q9NVH1 559 aa19.66■□□□□ 0.74
VSX1-206ENST00000444511 MRPS33Q9Y291 106 aaKnown RBP19.66■□□□□ 0.74
VSX1-206ENST00000444511 CREBBPQ92793 2442 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 FAM187AA6NFU0 413 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 CXorf49A8MYA2 514 aaPredicted RBP19.65■□□□□ 0.74
VSX1-206ENST00000444511 TAPBPO15533 448 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 CLEC3AO75596 197 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 WISP3O95389 354 aaPredicted RBP19.65■□□□□ 0.74
VSX1-206ENST00000444511 ABOP16442 354 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 STMN1P16949 149 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 SMSP52788 366 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 PLA2G16P53816 162 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 HSD17B7P56937 341 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 RAB38P57729 211 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 ATP6V0D1P61421 351 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 SLC13A2Q13183 592 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms