RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 CAPN13Q6MZZ7 669 aaPredicted RBP8.77□□□□□ -1.01
TOP1-201ENST00000361337 BHLHB9Q6PI77 547 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.77□□□□□ -1.01
TOP1-201ENST00000361337 SLC44A2Q8IWA5 706 aaPredicted RBP8.77□□□□□ -1.01
TOP1-201ENST00000361337 METTL4Q8N3J2 472 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 NKAPQ8N5F7 415 aaKnown RBP8.77□□□□□ -1.01
TOP1-201ENST00000361337 PARP16Q8N5Y8 322 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 TTC29Q8NA56 475 aaPredicted RBP8.77□□□□□ -1.01
TOP1-201ENST00000361337 OR14C36Q8NHC7 312 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 LKAAEAR1Q8TD35 194 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 PLD4Q96BZ4 506 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 C1orf74Q96LT6 269 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 DPH2Q9BQC3 489 aaPredicted RBP8.77□□□□□ -1.01
TOP1-201ENST00000361337 CDADC1Q9BWV3 514 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 GPRC5BQ9NZH0 403 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 PDP1Q9P0J1 537 aaPredicted RBP8.77□□□□□ -1.01
TOP1-201ENST00000361337 ATPIF1Q9UII2 106 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 SPTA1P02549 2419 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 AGAP5A6NIR3 686 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 SLC9A3R1O14745 358 aaPredicted RBP8.77□□□□□ -1.01
TOP1-201ENST00000361337 SEC22BO75396 215 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 TOXO94900 526 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 SCELO95171 688 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 PRAMEF1O95521 474 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 ADH1CP00326 375 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 ITGAMP11215 1152 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 ACADMP11310 421 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 SLC6A11P48066 632 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 CDC20Q12834 499 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 UGT8Q16880 541 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 ZNF404Q494X3 552 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 SPDYE7PQ495Y7 208 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 NXNL2Q5VZ03 156 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 SHQ1Q6PI26 577 aaKnown RBP8.77□□□□□ -1.01
TOP1-201ENST00000361337 RGL4Q8IZJ4 473 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 OR6C4Q8NGE1 309 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 FAM120BQ96EK7 910 aaKnown RBP8.77□□□□□ -1.01
TOP1-201ENST00000361337 MAP6Q96JE9 813 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 EGLN2Q96KS0 407 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 RDH8Q9NYR8 311 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 TAS2R16Q9NYV7 291 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 SNX6Q9UNH7 406 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 POLHQ9Y253 713 aa8.77□□□□□ -1.01
TOP1-201ENST00000361337 METTL15A6NJ78 407 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 PLD2O14939 933 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 PRAMEF11O60813 436 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 DNAJB5O75953 348 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 SLC25A14O95258 325 aaPredicted RBP8.76□□□□□ -1.01
TOP1-201ENST00000361337 RPS3P23396 243 aaKnown RBP eCLIP8.76□□□□□ -1.01
TOP1-201ENST00000361337 HTR7P34969 479 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 SLC19A1P41440 591 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 CLCN7P51798 805 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 NFE2L1Q14494 772 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 KLHL12Q53G59 568 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 KDM4DQ6B0I6 523 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 TSPAN33Q86UF1 283 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 GALNT13Q8IUC8 556 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 PLPP6Q8IY26 295 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 TOR1AIP2Q8NFQ8 470 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 MED8Q96G25 268 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 PDLIM5Q96HC4 596 aaKnown RBP8.76□□□□□ -1.01
TOP1-201ENST00000361337 Q96MT0 163 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 BOCQ9BWV1 1114 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 CRISPLD2Q9H0B8 497 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 MMP28Q9H239 520 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 OR51E2Q9H255 320 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 C1orf109Q9NX04 203 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 SLC6A14Q9UN76 642 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 TESMINQ9Y4I5 508 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 CFAP20Q9Y6A4 193 aaKnown RBP8.76□□□□□ -1.01
TOP1-201ENST00000361337 DOCK4Q8N1I0 1966 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 ANTXRLA6NF34 631 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 YES1P07947 543 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 ELFN1P0C7U0 828 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 ADH5P11766 374 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 HOXB8P17481 243 aaPredicted RBP8.76□□□□□ -1.01
TOP1-201ENST00000361337 PTPN6P29350 595 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 SLC15A1P46059 708 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 ZXDBP98169 803 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 UBXN2BQ14CS0 331 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 GPR153Q6NV75 609 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 AFTPHQ6ULP2 937 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 Q6ZVL8 140 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 FAM217AQ8IXS0 508 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 ENTHD1Q8IYW4 607 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 RNF175Q8N4F7 328 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 SVOPQ8N4V2 548 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 EID2BQ96D98 161 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 TSSK3Q96PN8 268 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 CPPED1Q9BRF8 314 aaPredicted RBP8.76□□□□□ -1.01
TOP1-201ENST00000361337 ZBP1Q9H171 429 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 CLMPQ9H6B4 373 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 PDFQ9HBH1 243 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 CPNE5Q9HCH3 593 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 SPHK2Q9NRA0 654 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 TMEM184CQ9NVA4 438 aa8.76□□□□□ -1.01
TOP1-201ENST00000361337 ZNF624Q9P2J8 865 aaPredicted RBP8.76□□□□□ -1.01
TOP1-201ENST00000361337 NDRG4Q9ULP0 352 aaKnown RBP8.76□□□□□ -1.01
TOP1-201ENST00000361337 YBX2Q9Y2T7 364 aaKnown RBP8.76□□□□□ -1.01
TOP1-201ENST00000361337 IGLV3-10A0A075B6K4 115 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms