RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 C17orf113A0A1B0GUU1 675 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 A0A1W2PRB8 838 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 GRXCR1A8MXD5 290 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 NFATC1O95644 943 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 PSMB5P28074 263 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 WASP42768 502 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 PDE7AQ13946 482 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 CTF1Q16619 201 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 TSPYL5Q86VY4 417 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 OR52N2Q8NGI0 321 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 SUSD6Q92537 303 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 ZNF514Q96K75 400 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 EPYCQ99645 322 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 ABCG4Q9H172 646 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 DUSP21Q9H596 190 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 CERS4Q9HA82 394 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 MYNNQ9NPC7 610 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 MIEF1Q9NQG6 463 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 C1GALT1Q9NS00 363 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 CUEDC1Q9NWM3 386 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 GPR34Q9UPC5 381 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 CORINQ9Y5Q5 1042 aa17.56■□□□□ 0.4
SHKBP1-201ENST00000291842 FEZF1A0PJY2 475 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 SH3PXD2BA1X283 911 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 PI15O43692 258 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 WBP4O75554 376 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 CDH12P55289 794 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 SPIBQ01892 262 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 ZNF829Q3KNS6 432 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 AMZ2Q86W34 360 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 CROCCP3Q8IVE0 287 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 SLC15A4Q8N697 577 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 ASB16Q96NS5 453 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 TAS2R9Q9NYW1 312 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 TAAR2Q9P1P5 351 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 C5AR2Q9P296 337 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 PNMA8BQ9ULN7 279 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 TRANK1O15050 2925 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 DOCK9Q9BZ29 2069 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 IGLON5A6NGN9 336 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 VEGFDO43915 354 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 JUNDP17535 347 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 PSMB9P28065 219 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 C21orf59P57076 290 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 RPS26P62854 115 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 DUS1LQ6P1R4 473 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 AHSA2Q719I0 299 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 ENTHD1Q8IYW4 607 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 SLC5A8Q8N695 610 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 GIPC3Q8TF64 312 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 RAD51AP1Q96B01 352 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 F2RL3Q96RI0 385 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 AMBNQ9NP70 447 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 SH3GLB1Q9Y371 365 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 NUMA1Q14980 2115 aa17.55■□□□□ 0.4
SHKBP1-201ENST00000291842 CLPXO76031 633 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 TPP2P29144 1249 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 ALDH9A1P49189 494 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 CDK6Q00534 326 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 UBE3AQ05086 875 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 MOGQ16653 247 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 TMEM52BQ4KMG9 183 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 PDZD3Q86UT5 571 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 ANKRD13BQ86YJ7 626 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 APH1BQ8WW43 257 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 FGF13Q92913 245 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 PCDHGA6Q9Y5G7 932 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 GMEB1Q9Y692 573 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 HSPE1-MOB4S4R3N1 261 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 GOLGA4Q13439 2230 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 PLPP1O14494 284 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 TOR1BO14657 336 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 TBX6O95947 436 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 POU2F1P14859 743 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 PTX3P26022 381 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 PIK3CBP42338 1070 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 IFI44LQ53G44 452 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 GET4Q7L5D6 327 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 FAM129CQ86XR2 697 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 ANKRD53Q8N9V6 530 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 BORCS5Q969J3 196 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 PRSS16Q9NQE7 514 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 HCN2Q9UL51 889 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 RAB23Q9ULC3 237 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 SZT2Q5T011 3432 aa17.54■□□□□ 0.4
SHKBP1-201ENST00000291842 RGS10O43665 173 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 RB1P06400 928 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 KELP23276 732 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 PHEXP78562 749 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 FCHO2Q0JRZ9 810 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 LRRC74AQ0VAA2 488 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 GANABQ14697 944 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 EXOC3L2Q2M3D2 409 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 PNCKQ6P2M8 343 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 TRIM40Q6P9F5 258 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 C16orf87Q6PH81 154 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 SLC9B2Q86UD5 537 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 SETD7Q8WTS6 366 aaKnown RBP17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 DNASE1L2Q92874 299 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 SMARCD2Q92925 531 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms