RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ALOXE3Q9BYJ1 711 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 TM9SF3Q9HD45 589 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 THAP10Q9P2Z0 257 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 NEUROG3Q9Y4Z2 214 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 A3GALT2U3KPV4 340 aa16.41■□□□□ 0.22
SHKBP1-205ENST00000594973 LRRK1Q38SD2 2015 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 PAPLNO95428 1278 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 C1orf105O95561 183 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 B3GALT4O96024 378 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 MT-ND1P03886 318 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 SPNP16150 400 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 HRH2P25021 359 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 HTR1EP28566 365 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 VBP1P61758 197 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 MRPS15P82914 257 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 CD47Q08722 323 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 GTF2H3Q13889 308 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 SF1Q15637 639 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 CTU2Q2VPK5 515 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 GTDC1Q4AE62 458 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 CEP78Q5JTW2 689 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 ATAD3CQ5T2N8 411 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 LIPJQ5W064 366 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 PNCKQ6P2M8 343 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 SYCE2Q6PIF2 218 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 CCBE1Q6UXH8 406 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 SYTL1Q8IYJ3 562 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 CHPFQ8IZ52 775 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 MCFD2Q8NI22 146 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 TMBIM1Q969X1 311 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 CMTM7Q96FZ5 175 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 DEPDC7Q96QD5 511 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 MYADMQ96S97 322 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 IKZF5Q9H5V7 419 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 TRIM39Q9HCM9 518 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 PCYT1BQ9Y5K3 369 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 AGAP5A6NIR3 686 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 CENPXA8MT69 81 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 FAM25AB3EWG3 89 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 FAM25CB3EWG5 89 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 FAM25GB3EWG6 89 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 TBX1O43435 398 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 POP7O75817 140 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 MFN2O95140 757 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 GDI1P31150 447 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 ZNF45Q02386 682 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 PIGFQ07326 219 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 DPTQ07507 201 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 NFE2L1Q14494 772 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 DUSP7Q16829 419 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 SYT6Q5T7P8 510 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 LAIR2Q6ISS4 152 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 PARM1Q6UWI2 310 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 ZNF765Q7L2R6 523 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 STK32CQ86UX6 486 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 FIG4Q92562 907 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 FGF14Q92915 247 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 SDCCAG3Q96C92 435 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 RNF145Q96MT1 663 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 SEPHS2Q99611 448 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 RPP25Q9BUL9 199 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 EPHX3Q9H6B9 360 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 EPS8L2Q9H6S3 715 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 SLC28A3Q9HAS3 691 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 SLC6A13Q9NSD5 602 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 SLC25A37Q9NYZ2 338 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 USE1Q9NZ43 259 aa16.4■□□□□ 0.22
SHKBP1-205ENST00000594973 MUC22E2RYF6 1773 aaPredicted RBP16.39■□□□□ 0.22
SHKBP1-205ENST00000594973 AMD1P17707 334 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 SOX9P48436 509 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 CLDN8P56748 225 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 GALK2Q01415 458 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 FADDQ13158 208 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 IL18R1Q13478 541 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 STARD3Q14849 445 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 TMEM52BQ4KMG9 183 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 ZNF658BQ4V348 819 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 BCL7AQ4VC05 210 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 PYCR3Q53H96 274 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 GLYATQ6IB77 296 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 NOXRED1Q6NXP6 359 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 DTWD1Q8N5C7 304 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 OR10A6Q8NH74 314 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 CDC26Q8NHZ8 85 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 ZNF480Q8WV37 535 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 MBOAT4Q96T53 435 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 CAB39Q9Y376 341 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 IGLON5A6NGN9 336 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 CCRL2O00421 344 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 MID1O15344 667 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 PCCBP05166 539 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 PRPS2P11908 318 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 PKLRP30613 574 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 RRM2P31350 389 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 RYKP34925 604 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 DEFA1P59665 94 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 DEFA3P59666 94 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 ISL1P61371 349 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 ZFP69Q49AA0 526 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 PIP5KL1Q5T9C9 394 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms