RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 GDF5P43026 501 aa18.51■□□□□ 0.55
SFXN1-203ENST00000502393 STXBP1P61764 594 aaKnown RBP18.51■□□□□ 0.55
SFXN1-203ENST00000502393 TGFBIQ15582 683 aa18.51■□□□□ 0.55
SFXN1-203ENST00000502393 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.51■□□□□ 0.552e-8■■■□□ 17.9
SFXN1-203ENST00000502393 C1QL3Q5VWW1 255 aa18.51■□□□□ 0.55
SFXN1-203ENST00000502393 SLCO4C1Q6ZQN7 724 aa18.51■□□□□ 0.55
SFXN1-203ENST00000502393 CAPN12Q6ZSI9 719 aa18.51■□□□□ 0.55
SFXN1-203ENST00000502393 FJX1Q86VR8 437 aa18.51■□□□□ 0.55
SFXN1-203ENST00000502393 TCAIMQ8N3R3 496 aa18.51■□□□□ 0.55
SFXN1-203ENST00000502393 HORMAD2Q8N7B1 307 aa18.51■□□□□ 0.55
SFXN1-203ENST00000502393 SPATA4Q8NEY3 305 aa18.51■□□□□ 0.55
SFXN1-203ENST00000502393 SEC16BQ96JE7 1060 aa18.51■□□□□ 0.55
SFXN1-203ENST00000502393 SIGLEC12Q96PQ1 595 aa18.51■□□□□ 0.55
SFXN1-203ENST00000502393 SAYSD1Q9NPB0 183 aa18.51■□□□□ 0.55
SFXN1-203ENST00000502393 PRDM9Q9NQV7 894 aa18.51■□□□□ 0.55
SFXN1-203ENST00000502393 SEC14L3Q9UDX4 400 aa18.51■□□□□ 0.55
SFXN1-203ENST00000502393 ZG16O60844 167 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 PIAS1O75925 651 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 UNC5CO95185 931 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 CD46P15529 392 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 SSTR1P30872 391 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 BTG2P78543 158 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 MRPS25P82663 173 aaKnown RBP18.5■□□□□ 0.55
SFXN1-203ENST00000502393 OR1C1Q15619 314 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 TOR1AIP1Q5JTV8 583 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 CDKL4Q5MAI5 379 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 TMIGD1Q6UXZ0 262 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 KRT78Q8N1N4 520 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 SCMH1Q96GD3 660 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 CPNE1Q99829 537 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 PITHD1Q9GZP4 211 aaPredicted RBP18.5■□□□□ 0.55
SFXN1-203ENST00000502393 DPH5Q9H2P9 285 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 NT5DC2Q9H857 520 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 CNOT10Q9H9A5 744 aaKnown RBP18.5■□□□□ 0.55
SFXN1-203ENST00000502393 ANKRD10Q9NXR5 420 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 GPRC5BQ9NZH0 403 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 COPG2Q9UBF2 871 aa18.5■□□□□ 0.55
SFXN1-203ENST00000502393 IGKV3D-11A0A0A0MRZ8 115 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 TCRBV16S1A1N1A0A5B0 115 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 NCF1BA6NI72 391 aaPredicted RBP18.49■□□□□ 0.55
SFXN1-203ENST00000502393 SAGE2PA6NJ88 616 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 GABRR3A8MPY1 467 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 NCF1CA8MVU1 366 aaPredicted RBP18.49■□□□□ 0.55
SFXN1-203ENST00000502393 CXorf49A8MYA2 514 aaPredicted RBP18.49■□□□□ 0.55
SFXN1-203ENST00000502393 MAN1A2O60476 641 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 CCDC166P0CW27 439 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 NCF1P14598 390 aaPredicted RBP18.49■□□□□ 0.55
SFXN1-203ENST00000502393 GGT5P36269 586 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 RBPJQ06330 500 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 C18orf21Q32NC0 220 aaPredicted RBP18.49■□□□□ 0.55
SFXN1-203ENST00000502393 SPINK14Q6IE38 97 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 C3orf62Q6ZUJ4 267 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 RPS19BP1Q86WX3 136 aaKnown RBP18.49■□□□□ 0.55
SFXN1-203ENST00000502393 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.49■□□□□ 0.55
SFXN1-203ENST00000502393 CYP4X1Q8N118 509 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 SLC34A3Q8N130 599 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 CA13Q8N1Q1 262 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 TMEM178AQ8NBL3 297 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 ARMC2Q8NEN0 867 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 GAL3ST3Q96A11 431 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 FAR2Q96K12 515 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 GPR22Q99680 433 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 RBBP8Q99708 897 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 AICDAQ9GZX7 198 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 CDCP1Q9H5V8 836 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 CAB39LQ9H9S4 337 aa18.49■□□□□ 0.55
SFXN1-203ENST00000502393 TCRBV9S1A1TA0A576 114 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 LRIT2A6NDA9 550 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 C4orf51C9J302 202 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 FAM227AF5H4B4 570 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 RAD51CO43502 376 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 GSTA2P09210 222 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 STMN1P16949 149 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 MAOAP21397 527 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 EEF1DP29692 281 aaKnown RBP18.48■□□□□ 0.55
SFXN1-203ENST00000502393 HPDP32754 393 aaPredicted RBP18.48■□□□□ 0.55
SFXN1-203ENST00000502393 ATP6V0D1P61421 351 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 BTN3A2P78410 334 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 PMP22Q01453 160 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 OC90Q02509 493 aaPredicted RBP18.48■□□□□ 0.55
SFXN1-203ENST00000502393 SLBPQ14493 270 aaKnown RBP eCLIP18.48■□□□□ 0.55
SFXN1-203ENST00000502393 CRYBG3Q68DQ2 2970 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 SULT1C3Q6IMI6 304 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 ZGRF1Q86YA3 2104 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 GPSM1Q86YR5 675 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 SPATA6LQ8N4H0 392 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 NPLQ9BXD5 320 aaPredicted RBP18.48■□□□□ 0.55
SFXN1-203ENST00000502393 UNKQ9C0B0 810 aaKnown RBP18.48■□□□□ 0.55
SFXN1-203ENST00000502393 RHBGQ9H310 441 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 EHD1Q9H4M9 534 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 KLHL1Q9NR64 748 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 GRHL1Q9NZI5 618 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 MMACHCQ9Y4U1 282 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 CELSR2Q9HCU4 2923 aa18.48■□□□□ 0.55
SFXN1-203ENST00000502393 CROCCQ5TZA2 2017 aa18.47■□□□□ 0.55
SFXN1-203ENST00000502393 A0A088AWK7 358 aa18.47■□□□□ 0.55
SFXN1-203ENST00000502393 TRGV8A0A0C4DH27 118 aa18.47■□□□□ 0.55
SFXN1-203ENST00000502393 ASPDHA6ND91 283 aa18.47■□□□□ 0.55
SFXN1-203ENST00000502393 FAM159BA6NKW6 160 aa18.47■□□□□ 0.55
SFXN1-203ENST00000502393 TAPBPO15533 448 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms