RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 TBC1D3CQ6IPX1 549 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 CCBE1Q6UXH8 406 aaPredicted RBP16.8■□□□□ 0.28
PTPRU-202ENST00000373779 TBC1D3Q8IZP1 549 aaPredicted RBP16.8■□□□□ 0.28
PTPRU-202ENST00000373779 KCNN1Q92952 543 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 NT5C3BQ969T7 300 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 NEK6Q9HC98 313 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 TAS2R9Q9NYW1 312 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 MAGED1Q9Y5V3 778 aaPredicted RBP16.8■□□□□ 0.28
PTPRU-202ENST00000373779 RFPL2O75678 378 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 AMD1P17707 334 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 CSNK2A2P19784 350 aaPredicted RBP16.8■□□□□ 0.28
PTPRU-202ENST00000373779 SLC13A2Q13183 592 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 IQCHQ86VS3 1027 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 MAELQ96JY0 434 aaKnown RBP16.8■□□□□ 0.28
PTPRU-202ENST00000373779 SYT17Q9BSW7 474 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 ZNF224Q9NZL3 707 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 N6AMT1Q9Y5N5 214 aa16.8■□□□□ 0.28
PTPRU-202ENST00000373779 HEMK1Q9Y5R4 338 aaPredicted RBP16.8■□□□□ 0.28
PTPRU-202ENST00000373779 KEAP1Q14145 624 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 FOXB2Q5VYV0 432 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 SPRED1Q7Z699 444 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 MDGA1Q8NFP4 955 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 TRMT61BQ9BVS5 477 aaKnown RBP16.79■□□□□ 0.28
PTPRU-202ENST00000373779 GMPR2Q9P2T1 348 aaKnown RBP16.79■□□□□ 0.28
PTPRU-202ENST00000373779 SOCS7O14512 581 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 DNTTP04053 509 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 CKMT1AP12532 417 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 STARP49675 285 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 KIAA1324Q6UXG2 1013 aaKnown RBP16.79■□□□□ 0.28
PTPRU-202ENST00000373779 PRR23CQ6ZRP0 262 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 DCP2Q8IU60 420 aaKnown RBP16.79■□□□□ 0.28
PTPRU-202ENST00000373779 OR9A1PQ8NGU1 263 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 SH3YL1Q96HL8 342 aaPredicted RBP16.79■□□□□ 0.28
PTPRU-202ENST00000373779 FEVQ99581 238 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 UTS2RQ9UKP6 389 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 IKZF2Q9UKS7 526 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 NHSQ6T4R5 1651 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 A8MV72 311 aaPredicted RBP16.79■□□□□ 0.28
PTPRU-202ENST00000373779 POP7O75817 140 aaKnown RBP16.79■□□□□ 0.28
PTPRU-202ENST00000373779 CRHBPP24387 322 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 ADAM15Q13444 863 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 ANKDD1AQ495B1 522 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 PSRC1Q6PGN9 363 aaPredicted RBP16.79■□□□□ 0.28
PTPRU-202ENST00000373779 Q6ZVL8 140 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 CLECL1Q8IZS7 167 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 PAPD5Q8NDF8 572 aaKnown RBP16.79■□□□□ 0.28
PTPRU-202ENST00000373779 WFIKKN2Q8TEU8 576 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 MRPS33Q9Y291 106 aaKnown RBP16.79■□□□□ 0.28
PTPRU-202ENST00000373779 INSL5Q9Y5Q6 135 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 DUXAA6NLW8 204 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 SCAMP2O15127 329 aaKnown RBP16.79■□□□□ 0.28
PTPRU-202ENST00000373779 PRAMEF12O95522 483 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 WASP42768 502 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 CDH11P55287 796 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 CBLBQ13191 982 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 TBRG1Q3YBR2 411 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 SLC36A4Q6YBV0 504 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 PIANPQ8IYJ0 282 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 SAMD14Q8IZD0 417 aaPredicted RBP16.79■□□□□ 0.28
PTPRU-202ENST00000373779 ZCCHC10Q8TBK6 192 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 SMG7Q92540 1137 aaKnown RBP16.79■□□□□ 0.28
PTPRU-202ENST00000373779 GPR83Q9NYM4 423 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 GPRC5BQ9NZH0 403 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 PRKAB1Q9Y478 270 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 PCDHA9Q9Y5H5 950 aa16.79■□□□□ 0.28
PTPRU-202ENST00000373779 KRBA1A5PL33 1030 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 PLOD2O00469 737 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 SLC25A12O75746 678 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 KLHL18O94889 574 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 APLP1P51693 650 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 SUSD1Q6UWL2 747 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 FRRS1Q6ZNA5 592 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 RHBDF1Q96CC6 855 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 VMP1Q96GC9 406 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 RAB11FIP5Q9BXF6 653 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 SMIM30A4D0T7 59 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 ENTPD6O75354 484 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 BPIP17213 487 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 RPS3P23396 243 aaKnown RBP eCLIP16.78■□□□□ 0.283e-10■■■□□ 16.6
PTPRU-202ENST00000373779 CD97P48960 835 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 DOC2AQ14183 400 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 MEDAGQ5VYS4 303 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 OR8H3Q8N146 312 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 SHKBP1Q8TBC3 707 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 ARRDC2Q8TBH0 407 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 RAB8BQ92930 207 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 LOXHD1Q8IVV2 1947 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 GALTP07902 379 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 GADD45AP24522 165 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 PROX2Q3B8N5 592 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 RBM23Q86U06 439 aaKnown RBP16.78■□□□□ 0.28
PTPRU-202ENST00000373779 CHDHQ8NE62 594 aaPredicted RBP16.78■□□□□ 0.28
PTPRU-202ENST00000373779 PROKR1Q8TCW9 393 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 LCN9Q8WX39 176 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 NAA50Q9GZZ1 169 aaKnown RBP16.78■□□□□ 0.28
PTPRU-202ENST00000373779 SOHLH2Q9NX45 425 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 PFDN2Q9UHV9 154 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 TSPAN9O75954 239 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 SERPINA3P01011 423 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 CPN2P22792 545 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms