RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ATP6V1G1O75348 118 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 MATN1P21941 496 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 DOC2AQ14183 400 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 MSANTD1Q6ZTZ1 278 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 FBXO15Q8NCQ5 510 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 C15orf40Q8WUR7 153 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 RAB8BQ92930 207 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 SOX17Q9H6I2 414 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 KCNK13Q9HB14 408 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 ARMC1Q9NVT9 282 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 PCDHGA2Q9Y5H1 932 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 CAPN14A8MX76 684 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 ST3GAL4Q11206 333 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 SLITRK4Q8IW52 837 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 ZNF527Q8NB42 609 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 FBXO27Q8NI29 283 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 SMG9Q9H0W8 520 aaKnown RBP16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 PFDN2Q9UHV9 154 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 TMEM5Q9Y2B1 443 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 TMEM98Q9Y2Y6 226 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 CCRL2O00421 344 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 NOS1APO75052 506 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 AHCYP23526 432 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 PCBP2Q15366 365 aaKnown RBP eCLIP16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 ZNF676Q8N7Q3 588 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 OSTF1Q92882 214 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 FAM129BQ96TA1 746 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 GSTO2Q9H4Y5 243 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 ARNT2Q9HBZ2 717 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 Q9N2J8 555 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 NDRG2Q9UN36 371 aaKnown RBP16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 HSPE1-MOB4S4R3N1 261 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 CPNE3O75131 537 aaKnown RBP16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 GRIA2P42262 883 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 DCDC1P59894 354 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 RPP38P78345 283 aaKnown RBP16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 SMU1Q2TAY7 513 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 ERN2Q76MJ5 926 aaKnown RBP16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 TRIM74Q86UV6 250 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 NLGN3Q9NZ94 848 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 CLCA3PQ9Y6N3 262 aa16.48■□□□□ 0.23
TRAPPC11-201ENST00000334690 H7BY64 318 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 ARHGEF15O94989 841 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 CCL5P13501 91 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 CAPN3P20807 821 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 OR1E2P47887 323 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 ENPP2Q13822 863 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 DSG2Q14126 1118 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 WSCD2Q2TBF2 565 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 TMEM130Q8N3G9 435 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 C1orf216Q8TAB5 229 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 PRAP1Q96NZ9 151 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 C17orf62Q9BQA9 187 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 EXO5Q9H790 373 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 PLEKHA1Q9HB21 404 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 DNAJC27Q9NZQ0 273 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 MYOCOSA0A1B0GUC4 107 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 C2orf78A6NCI8 922 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 WASH4PA8MWX3 477 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 GNB5O14775 395 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 CDRT1O95170 752 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 RAB36O95755 333 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 HLA-EP13747 358 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 GCAP28676 217 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 GNALP38405 381 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 INHBCP55103 352 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 VBP1P61758 197 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 ADAM8P78325 824 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 ZNF45Q02386 682 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 PON3Q15166 354 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 NIPAL1Q6NVV3 410 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 SLC22A16Q86VW1 577 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 CMTR2Q8IYT2 770 aaKnown RBP16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 SCRN2Q96FV2 425 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 LGR4Q9BXB1 951 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 SLCO3A1Q9UIG8 710 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 PCDHGA7Q9Y5G6 932 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 ZNF879B4DU55 563 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 ERVPABLB-1P60509 514 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 MS4A2Q01362 244 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 ZNF789Q5FWF6 425 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 CDKL4Q5MAI5 379 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 LINGO2Q7L985 606 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 BBS10Q8TAM1 723 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 MAFFQ9ULX9 164 aa16.47■□□□□ 0.23
TRAPPC11-201ENST00000334690 AURKAO14965 403 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 LDB2O43679 373 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 VEGFDO43915 354 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 GGT1P19440 569 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 F8A1P23610 371 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 DGKEP52429 567 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 ZNF33BQ06732 778 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 LSAMPQ13449 338 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 PON2Q15165 354 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 ATP6V1C2Q8NEY4 427 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 OR4E2Q8NGC2 313 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 TBL1XR1Q9BZK7 514 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 IL17CQ9P0M4 197 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 AASSQ9UDR5 926 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 PKD1L3Q7Z443 1732 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms