RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 GLYATL1Q969I3 302 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 DAZAP1Q96EP5 407 aaKnown RBP11.7□□□□□ -0.54
PCF11-201ENST00000298281 KCNIP1Q9NZI2 227 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 K7EPI3 171 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 CXCR6O00574 342 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 VILLO15195 856 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 PRPS1L1P21108 318 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 PPA1Q15181 289 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 UGCGQ16739 394 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 ASTE1Q2TB18 679 aaPredicted RBP11.7□□□□□ -0.54
PCF11-201ENST00000298281 SLC13A3Q8WWT9 602 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 ZNF599Q96NL3 588 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 SULT4A1Q9BR01 284 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 FNIP2Q9P278 1114 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 MYEF2Q9P2K5 600 aaKnown RBP11.7□□□□□ -0.54
PCF11-201ENST00000298281 B3GALT1Q9Y5Z6 326 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 GSTM3P21266 225 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 DGKZQ13574 1117 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 CBR4Q8N4T8 237 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 FAM160A2Q8N612 972 aaPredicted RBP11.7□□□□□ -0.54
PCF11-201ENST00000298281 OR52E4Q8NGH9 312 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 ATG5Q9H1Y0 275 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 C1orf21Q9H246 121 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 GLSO94925 669 aaPredicted RBP11.7□□□□□ -0.54
PCF11-201ENST00000298281 GOT2P00505 430 aaKnown RBP11.7□□□□□ -0.54
PCF11-201ENST00000298281 THBS2P35442 1172 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 CLCN4P51793 760 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 ATXN7L3Q14CW9 347 aaPredicted RBP11.7□□□□□ -0.54
PCF11-201ENST00000298281 KRBOX4Q5JUW0 171 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 C6orf141Q5SZD1 244 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 TPGS2Q68CL5 300 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 FSTL4Q6MZW2 842 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 S100A16Q96FQ6 103 aaKnown RBP11.7□□□□□ -0.54
PCF11-201ENST00000298281 TAS2R3Q9NYW6 316 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 DNAJB9Q9UBS3 223 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 DEPDC5O75140 1603 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 TMEM88BA6NKF7 163 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 CDC7O00311 574 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 RHOP08100 348 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 TGM1P22735 817 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 RBMS1P29558 406 aaKnown RBP11.7□□□□□ -0.54
PCF11-201ENST00000298281 GANABQ14697 944 aaKnown RBP11.7□□□□□ -0.54
PCF11-201ENST00000298281 MSI2Q96DH6 328 aaKnown RBP11.7□□□□□ -0.54
PCF11-201ENST00000298281 TFB2MQ9H5Q4 396 aaKnown RBP11.7□□□□□ -0.54
PCF11-201ENST00000298281 B4GALT7Q9UBV7 327 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 A0A0U1RQJ8 604 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 CBSLP0DN79 551 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 RPL10P27635 214 aaKnown RBP11.7□□□□□ -0.54
PCF11-201ENST00000298281 S100A7P31151 101 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 CBSP35520 551 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 LILRA4P59901 499 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 C11orf84Q9BUA3 381 aaPredicted RBP11.7□□□□□ -0.54
PCF11-201ENST00000298281 SLC39A1Q9NY26 324 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 IGSF9Q9P2J2 1179 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 FBXW11Q9UKB1 542 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 NPFFR2Q9Y5X5 522 aa11.7□□□□□ -0.54
PCF11-201ENST00000298281 AHSA1O95433 338 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 RIPPLY1Q0D2K3 151 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 VARS2Q5ST30 1063 aaKnown RBP11.69□□□□□ -0.54
PCF11-201ENST00000298281 C17orf50Q8WW18 174 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 DUSP26Q9BV47 211 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 PDZD7Q9H5P4 517 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 CENPBD1B2RD01 187 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 TSPAN15O95858 294 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 SLC2A2P11168 524 aaPredicted RBP11.69□□□□□ -0.54
PCF11-201ENST00000298281 GGT2P36268 569 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 MPP1Q00013 466 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 NUDT13Q86X67 352 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 OR13C3Q8NGS6 347 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 OR10A6Q8NH74 314 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 C7orf34Q96L11 122 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 OR2M4Q96R27 311 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 EPCAMP16422 314 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 ARL2P36404 184 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 XKP51811 444 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 OR2B6P58173 313 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 IQCCQ4KMZ1 466 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 LANCL3Q6ZV70 420 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 CREB3L2Q70SY1 520 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 ZNF283Q8N7M2 679 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 OR5K1Q8NHB7 308 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 THAP3Q8WTV1 239 aaPredicted RBP11.69□□□□□ -0.54
PCF11-201ENST00000298281 HMCESQ96FZ2 354 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 SNX27Q96L92 541 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 OR51B6Q9H340 312 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 GRXCR1A8MXD5 290 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 RPL13AP40429 203 aaKnown RBP11.69□□□□□ -0.54
PCF11-201ENST00000298281 SERINC3Q13530 473 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 NFE2L1Q14494 772 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 LRRC73Q5JTD7 316 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 LBX2Q6XYB7 198 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 ERI1Q8IV48 349 aaKnown RBP11.69□□□□□ -0.54
PCF11-201ENST00000298281 C12orf43Q96C57 262 aaKnown RBP11.69□□□□□ -0.54
PCF11-201ENST00000298281 LRRC3Q9BY71 257 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 RETREG1Q9H6L5 497 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 SMCO4Q9NRQ5 59 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 FTSJ1Q9UET6 329 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 A0A0G2JN53 185 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 RCCD1A6NED2 376 aa11.69□□□□□ -0.54
PCF11-201ENST00000298281 PIAS1O75925 651 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms