RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 RGNQ15493 299 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 EXOC3L2Q2M3D2 409 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 SLC35F1Q5T1Q4 408 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 LAX1Q8IWV1 398 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 CLECL1Q8IZS7 167 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 BTN2A2Q8WVV5 523 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 HTATIP2Q9BUP3 242 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 RNF121Q9H920 327 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 EXOSC4Q9NPD3 245 aaKnown RBP16.94■□□□□ 0.3
RAB40C-205ENST00000539661 ARL15Q9NXU5 204 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 Q9Y3F1 56 aa16.94■□□□□ 0.3
RAB40C-205ENST00000539661 ARHGEF9O43307 516 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 PURAQ00577 322 aaKnown RBP16.93■□□□□ 0.3
RAB40C-205ENST00000539661 CEP78Q5JTW2 689 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 FRG2Q64ET8 278 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 CADM2Q8N3J6 435 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 CLDN19Q8N6F1 224 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 KIAA1143Q96AT1 154 aaPredicted RBP16.93■□□□□ 0.3
RAB40C-205ENST00000539661 FRG2BQ96QU4 278 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 GIMAP4Q9NUV9 329 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 KCTD5Q9NXV2 234 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 STUB1Q9UNE7 303 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 LSM2Q9Y333 95 aaKnown RBP16.93■□□□□ 0.3
RAB40C-205ENST00000539661 C1orf226A1L170 272 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 CBX4O00257 560 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 ICMTO60725 284 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 LGI1O95970 557 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 CTSHP09668 335 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 NUDT7P0C024 238 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 CTGFP29279 349 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 CSTF2P33240 577 aaKnown RBP eCLIP16.93■□□□□ 0.3
RAB40C-205ENST00000539661 NUDT1P36639 197 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 IL12RB1P42701 662 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 CDH12P55289 794 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 FAM189BP81408 668 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 TWF1Q12792 350 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 FAPQ12884 760 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 PTGES3Q15185 160 aaKnown RBP16.93■□□□□ 0.3
RAB40C-205ENST00000539661 MEDAGQ5VYS4 303 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 CCDC149Q6ZUS6 474 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 GPR152Q8TDT2 470 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 COQ8BQ96D53 544 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 NIPAL2Q9H841 368 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 TRIM39Q9HCM9 518 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 TIGARQ9NQ88 270 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 HCN4Q9Y3Q4 1203 aa16.93■□□□□ 0.3
RAB40C-205ENST00000539661 ZAR1LA6NP61 321 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 ZNF780AO75290 641 aaPredicted RBP16.92■□□□□ 0.3
RAB40C-205ENST00000539661 GCM2O75603 506 aaPredicted RBP16.92■□□□□ 0.3
RAB40C-205ENST00000539661 ADRA2AP08913 450 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 M6PRP20645 277 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 HTR2BP41595 481 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 SLC11A2P49281 568 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 GPLD1P80108 840 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 PTCHD4Q6ZW05 846 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 VPS37AQ8NEZ2 397 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 B3GALT6Q96L58 329 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 DUSP26Q9BV47 211 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 EBPLQ9BY08 206 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 PCDHB9Q9Y5E1 797 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.92■□□□□ 0.3
RAB40C-205ENST00000539661 HYKKA2RU49 373 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 ARRDC5A6NEK1 342 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 HLA-EP13747 358 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 CPN2P22792 545 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 AZGP1P25311 298 aaKnown RBP16.92■□□□□ 0.3
RAB40C-205ENST00000539661 CRYBB2P43320 205 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 HNMTP50135 292 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 HMGA2P52926 109 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 MGAT3Q09327 533 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 ZNF177Q13360 481 aaPredicted RBP16.92■□□□□ 0.3
RAB40C-205ENST00000539661 TNK1Q13470 666 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 LARS2Q15031 903 aaKnown RBP16.92■□□□□ 0.3
RAB40C-205ENST00000539661 CHST9Q7L1S5 443 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 METTL2AQ96IZ6 378 aaKnown RBP16.92■□□□□ 0.3
RAB40C-205ENST00000539661 CCSER2Q9H7U1 834 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 FZD3Q9NPG1 666 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 RUVBL1Q9Y265 456 aaKnown RBP16.92■□□□□ 0.3
RAB40C-205ENST00000539661 UNC80Q8N2C7 3258 aa16.92■□□□□ 0.3
RAB40C-205ENST00000539661 PRAMEF12O95522 483 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 ZDHHC11BP0C7U3 371 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 SLC6A12P48065 614 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 RPS24P62847 133 aaKnown RBP16.91■□□□□ 0.3
RAB40C-205ENST00000539661 LRRC74AQ0VAA2 488 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 TAB1Q15750 504 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 ANXA8L1Q5VT79 327 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 FAM131AQ6UXB0 335 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 ZNF767PQ75MW2 155 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 BBS7Q8IWZ6 715 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 FAM109AQ8N4B1 249 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 MSLNLQ96KJ4 702 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 ARHGAP39Q9C0H5 1083 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 MCOLN1Q9GZU1 580 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 C11orf54Q9H0W9 315 aaPredicted RBP16.91■□□□□ 0.3
RAB40C-205ENST00000539661 SLC25A19Q9HC21 320 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 SNTG1Q9NSN8 517 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 SH3BP4Q9P0V3 963 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 FTSJ1Q9UET6 329 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 PADI3Q9ULW8 664 aa16.91■□□□□ 0.3
RAB40C-205ENST00000539661 INPPL1O15357 1258 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms