RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 PRRG4Q9BZD6 226 aa0.4□□□□□ -2.35
COPB1-212ENST00000534771 CCSER1Q9C0I3 900 aa0.4□□□□□ -2.35
COPB1-212ENST00000534771 IKZF5Q9H5V7 419 aa0.4□□□□□ -2.35
COPB1-212ENST00000534771 WASH6PQ9NQA3 447 aa0.4□□□□□ -2.35
COPB1-212ENST00000534771 ARHGEF38Q9NXL2 777 aa0.4□□□□□ -2.35
COPB1-212ENST00000534771 RRN3Q9NYV6 651 aa0.4□□□□□ -2.35
COPB1-212ENST00000534771 FBXL4Q9UKA2 621 aa0.4□□□□□ -2.35
COPB1-212ENST00000534771 ABT1Q9ULW3 272 aaKnown RBP0.4□□□□□ -2.35
COPB1-212ENST00000534771 NACAE9PAV3 2078 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 ITGB4P16144 1822 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 A0A0U1RQK1 487 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 A6NLC8 198 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 FOXI3A8MTJ6 420 aaPredicted RBP0.39□□□□□ -2.35
COPB1-212ENST00000534771 A8MVM7 634 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 CDRT15L2A8MXV6 281 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 FBP2O00757 339 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 IPO8O15397 1037 aaKnown RBP0.39□□□□□ -2.35
COPB1-212ENST00000534771 GPAA1O43292 621 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 EMC8O43402 210 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 SNAI2O43623 268 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 SNX3O60493 162 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 BAG3O95817 575 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 IGLV3-19P01714 112 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 DNTTP04053 509 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 TOP1P11387 765 aaKnown RBP0.39□□□□□ -2.35
COPB1-212ENST00000534771 SKILP12757 684 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 TRIM21P19474 475 aaKnown RBP0.39□□□□□ -2.35
COPB1-212ENST00000534771 CD27P26842 260 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 SFTPDP35247 375 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 MATR3P43243 847 aaKnown RBP eCLIP0.39□□□□□ -2.35
COPB1-212ENST00000534771 ALDH3B1P43353 468 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 ZNF75DP51815 510 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 NDST1P52848 882 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 PNLIPRP2P54317 469 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 MFAP4P55083 255 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 CXCL6P80162 114 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 RASGEF1BQ0VAM2 473 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 EIF4EBP1Q13541 118 aaPredicted RBP0.39□□□□□ -2.35
COPB1-212ENST00000534771 FASTKQ14296 549 aaKnown RBP0.39□□□□□ -2.35
COPB1-212ENST00000534771 SPANXN4Q5MJ08 99 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 KRT39Q6A163 491 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 IGFL1Q6UW32 110 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 TFAP2EQ6VUC0 442 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 TMTC3Q6ZXV5 915 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 IKBIPQ70UQ0 350 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 CPEB2Q7Z5Q1 589 aaKnown RBP0.39□□□□□ -2.35
COPB1-212ENST00000534771 KRT77Q7Z794 578 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 SLC22A18ASQ8N1D0 253 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 ZNF786Q8N393 782 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 LRTM2Q8N967 370 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 ANKRD42Q8N9B4 389 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 LINC01555Q8NAE3 123 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 C1orf131Q8NDD1 294 aaKnown RBP0.39□□□□□ -2.35
COPB1-212ENST00000534771 TBCKQ8TEA7 893 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 SCFD2Q8WU76 684 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 SNRNP27Q8WVK2 155 aaKnown RBP0.39□□□□□ -2.35
COPB1-212ENST00000534771 RFFLQ8WZ73 363 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 ROBO4Q8WZ75 1007 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 HDAC2Q92769 488 aaKnown RBP0.39□□□□□ -2.35
COPB1-212ENST00000534771 IL22RA2Q969J5 263 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 TSACCQ96A04 125 aaPredicted RBP0.39□□□□□ -2.35
COPB1-212ENST00000534771 SAT2Q96F10 170 aaPredicted RBP0.39□□□□□ -2.35
COPB1-212ENST00000534771 SCLT1Q96NL6 688 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 TECTBQ96PL2 329 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 RCHY1Q96PM5 261 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 NEDD4LQ96PU5 975 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 SEPHS2Q99611 448 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 SDCBP2Q9H190 292 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 OSGEPL1Q9H4B0 414 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 Q9H8V8 135 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 MYNNQ9NPC7 610 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 EQTNQ9NQ60 294 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 GSN-AS1Q9NRJ2 163 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 NECAP2Q9NVZ3 263 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 KLRF1Q9NZS2 232 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 TMEM9Q9P0T7 183 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 SENP1Q9P0U3 644 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 POLKQ9UBT6 870 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 PILRBQ9UKJ0 227 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 NIP7Q9Y221 180 aaKnown RBP eCLIP0.39□□□□□ -2.35
COPB1-212ENST00000534771 HBS1LQ9Y450 684 aaKnown RBP0.39□□□□□ -2.35
COPB1-212ENST00000534771 DGKBQ9Y6T7 804 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 MUC16Q8WXI7 14507 aa0.39□□□□□ -2.35
COPB1-212ENST00000534771 SLIT3O75094 1523 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 IGLV4-60A0A075B6I1 120 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 IGHV3-35A0A0C4DH35 117 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 A0A1W2PPQ1 181 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 CCDC189A1A4V9 331 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 CCL24O00175 119 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 SAP18O00422 153 aaKnown RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 SIGLEC5O15389 551 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 RPS6KA5O75582 802 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 TMEM63AO94886 807 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 IGKV1D-16P01601 117 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 YES1P07947 543 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 RAB40ALP0C0E4 278 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 DLATP10515 647 aaKnown RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 SAGP10523 405 aaPredicted RBP0.38□□□□□ -2.35
COPB1-212ENST00000534771 F3P13726 295 aa0.38□□□□□ -2.35
COPB1-212ENST00000534771 ZNF823P16415 610 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms