RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 SLC22A16Q86VW1 577 aa11.73□□□□□ -0.53
DDX41-215ENST00000512431 LIX1LQ8IVB5 337 aa11.73□□□□□ -0.53
DDX41-215ENST00000512431 KCT2Q8NC54 265 aa11.73□□□□□ -0.53
DDX41-215ENST00000512431 SLC13A3Q8WWT9 602 aa11.73□□□□□ -0.53
DDX41-215ENST00000512431 PTCHD1Q96NR3 888 aa11.73□□□□□ -0.53
DDX41-215ENST00000512431 SMC6Q96SB8 1091 aa11.73□□□□□ -0.53
DDX41-215ENST00000512431 DMRT3Q9NQL9 472 aa11.73□□□□□ -0.53
DDX41-215ENST00000512431 FBXW2Q9UKT8 454 aa11.73□□□□□ -0.53
DDX41-215ENST00000512431 ACAD8Q9UKU7 415 aa11.73□□□□□ -0.53
DDX41-215ENST00000512431 SLC22A7Q9Y694 548 aa11.73□□□□□ -0.53
DDX41-215ENST00000512431 FEZF1A0PJY2 475 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 ZNF860A6NHJ4 632 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 SAGE2PA6NJ88 616 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 FAM166BA8MTA8 275 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 E5RI56 91 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 B4GALT2O60909 372 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 WDR1O75083 606 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 ITGA10O75578 1167 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 ATE1O95260 518 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 CLCN2P51788 898 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 GDF10P55107 478 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 GBX1Q14549 363 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 TYSND1Q2T9J0 566 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 WLSQ5T9L3 541 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 SHEQ5VZ18 495 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 CAPN13Q6MZZ7 669 aaPredicted RBP11.72□□□□□ -0.53
DDX41-215ENST00000512431 MRNIPQ6NTE8 343 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 NIPAL1Q6NVV3 410 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 SLC26A11Q86WA9 606 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 PDSS2Q86YH6 399 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 ARMC10Q8N2F6 343 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 ARMC2Q8NEN0 867 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 FAM136AQ96C01 138 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 TM4SF19Q96DZ7 209 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 ATG10Q9H0Y0 220 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 CHRAC1Q9NRG0 131 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 ALKBH4Q9NXW9 302 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 KCMF1Q9P0J7 381 aa11.72□□□□□ -0.53
DDX41-215ENST00000512431 TRBV11-1A0A0K0K1C0 115 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 A8MVJ9 347 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 SYT5O00445 386 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 ARHGEF9O43307 516 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 ZBTB14O43829 449 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 NIPSNAP2O75323 286 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 ESR1P03372 595 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 PCSK6P29122 969 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 FDFT1P37268 417 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 SSR4P51571 173 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 NAP1L1P55209 391 aaKnown RBP11.71□□□□□ -0.53
DDX41-215ENST00000512431 NKX6-1P78426 367 aaPredicted RBP11.71□□□□□ -0.53
DDX41-215ENST00000512431 DAZAP2Q15038 168 aaPredicted RBP11.71□□□□□ -0.53
DDX41-215ENST00000512431 TTLL9Q3SXZ7 439 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 ACSBG2Q5FVE4 666 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 PCID2Q5JVF3 399 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 CTSL3PQ5NE16 218 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 RNF187Q5TA31 235 aaPredicted RBP11.71□□□□□ -0.53
DDX41-215ENST00000512431 NDUFAF5Q5TEU4 345 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 AADACL2Q6P093 401 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 KIAA0408Q6ZU52 694 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 GPALPP1Q8IXQ4 340 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 PSD4Q8NDX1 1056 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 OR5T3Q8NGG3 340 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 SARAFQ96BY9 339 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 BIRC8Q96P09 236 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 CCDC77Q9BR77 488 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 LDAHQ9H6V9 325 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 EXO5Q9H790 373 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 ZDHHC11Q9H8X9 412 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 ETNK1Q9HBU6 452 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 CCDC177Q9NQR7 707 aaPredicted RBP11.71□□□□□ -0.53
DDX41-215ENST00000512431 HPF1Q9NWY4 346 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 CBLCQ9ULV8 474 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 YARS2Q9Y2Z4 477 aaKnown RBP11.71□□□□□ -0.53
DDX41-215ENST00000512431 FAM215AQ9Y5M1 114 aa11.71□□□□□ -0.53
DDX41-215ENST00000512431 HSPB2A8KAH6 182 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 A8MUA0 341 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 PSMD12O00232 456 aaPredicted RBP11.7□□□□□ -0.54
DDX41-215ENST00000512431 SLC16A5O15375 505 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 CBFA2T2O43439 604 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 CHST10O43529 356 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 MFAP3LO75121 409 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 LY6G6DO95868 133 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 GABRA1P14867 456 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 STIP1P31948 543 aaKnown RBP11.7□□□□□ -0.54
DDX41-215ENST00000512431 GRIA1P42261 906 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 NR0B1P51843 470 aaKnown RBP11.7□□□□□ -0.54
DDX41-215ENST00000512431 PPP2R2BQ00005 443 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 PCBP2Q15366 365 aaKnown RBP eCLIP11.7□□□□□ -0.54
DDX41-215ENST00000512431 HSPB2Q16082 182 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 C1orf185Q5T7R7 199 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 RIPPLY2Q5TAB7 128 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 CAVIN1Q6NZI2 390 aaKnown RBP11.7□□□□□ -0.54
DDX41-215ENST00000512431 QSOX2Q6ZRP7 698 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 GK5Q6ZS86 529 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 REXO1L1PQ8IX06 675 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 FBXO15Q8NCQ5 510 aaPredicted RBP11.7□□□□□ -0.54
DDX41-215ENST00000512431 NFAM1Q8NET5 270 aaPredicted RBP11.7□□□□□ -0.54
DDX41-215ENST00000512431 OR2M7Q8NG81 312 aa11.7□□□□□ -0.54
DDX41-215ENST00000512431 CALR3Q96L12 384 aaKnown RBP11.7□□□□□ -0.54
DDX41-215ENST00000512431 CCDC138Q96M89 665 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms