RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ZNF888P0CJ79 500 aaPredicted RBP14.23□□□□□ -0.13
RNF4-210ENST00000508235 PCNAP12004 261 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 IL1RNP18510 177 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 IMPDH1P20839 514 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 IL10P22301 178 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 NKG7Q16617 165 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 TOR1AIP1Q5JTV8 583 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 ZNF678Q5SXM1 525 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 BEND6Q5SZJ8 279 aaPredicted RBP14.23□□□□□ -0.13
RNF4-210ENST00000508235 CEP85LQ5SZL2 805 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 C10orf62Q5T681 223 aaPredicted RBP14.23□□□□□ -0.13
RNF4-210ENST00000508235 AFAP1L2Q8N4X5 818 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 AMER3Q8N944 861 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 BANPQ8N9N5 519 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 SRFBP1Q8NEF9 429 aaKnown RBP14.23□□□□□ -0.13
RNF4-210ENST00000508235 STT3BQ8TCJ2 826 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 UTP15Q8TED0 518 aaKnown RBP14.23□□□□□ -0.13
RNF4-210ENST00000508235 GAL3ST3Q96A11 431 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 L3HYPDHQ96EM0 354 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 FAR2Q96K12 515 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 ZIM3Q96PE6 472 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 TGIF2Q9GZN2 237 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 STMN4Q9H169 189 aaPredicted RBP14.23□□□□□ -0.13
RNF4-210ENST00000508235 SEMA4BQ9NPR2 832 aaPredicted RBP14.23□□□□□ -0.13
RNF4-210ENST00000508235 SEMA3GQ9NS98 782 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 ARGLU1Q9NWB6 273 aaPredicted RBP14.23□□□□□ -0.13
RNF4-210ENST00000508235 CTSFQ9UBX1 484 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 EMCNQ9ULC0 261 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 NAALAD2Q9Y3Q0 740 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 SCN3AQ9NY46 2000 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 ANKRD11Q6UB99 2663 aaPredicted RBP14.23□□□□□ -0.13
RNF4-210ENST00000508235 PTPRQQ9UMZ3 2332 aa14.23□□□□□ -0.13
RNF4-210ENST00000508235 LRIT2A6NDA9 550 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 VSTM2BA6NLU5 285 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 OR7A17O14581 309 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 CTIFO43310 598 aaKnown RBP14.22□□□□□ -0.13
RNF4-210ENST00000508235 GALR3O60755 368 aaPredicted RBP14.22□□□□□ -0.13
RNF4-210ENST00000508235 ZGLP1P0C6A0 271 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 CPA3P15088 417 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 PIK3CBP42338 1070 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 CLCQ05315 142 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 HYAL2Q12891 473 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 COL9A2Q14055 689 aaPredicted RBP14.22□□□□□ -0.13
RNF4-210ENST00000508235 RBBP7Q16576 425 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 GGTA1PQ4G0N0 100 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 DEFB134Q4QY38 66 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 TMEM35AQ53FP2 167 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 TRIM40Q6P9F5 258 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 CHSY3Q70JA7 882 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 MILR1Q7Z6M3 343 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 DTWD1Q8N5C7 304 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 OR7G3Q8NG95 312 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 CENPKQ9BS16 269 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 ROGDIQ9GZN7 287 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 REXO4Q9GZR2 422 aaKnown RBP14.22□□□□□ -0.13
RNF4-210ENST00000508235 ZBTB26Q9HCK0 441 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 PLLPQ9Y342 182 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 WDFY3Q8IZQ1 3526 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 USP24Q9UPU5 2620 aa14.22□□□□□ -0.13
RNF4-210ENST00000508235 GOLGA6L10A6NI86 522 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 G3V2L1 256 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 H3BQF6 201 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 SGK494L7N484 410 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 ERVH48-1M5A8F1 160 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 PCDH17O14917 1159 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 CYC1P08574 325 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 DNAJB13P59910 316 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 ASPHQ12797 758 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 IL10RAQ13651 578 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 CPSF6Q16630 551 aaKnown RBP eCLIP14.21□□□□□ -0.13
RNF4-210ENST00000508235 ADPRMQ3LIE5 342 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 TTC19Q6DKK2 380 aaPredicted RBP14.21□□□□□ -0.13
RNF4-210ENST00000508235 BORAQ6PGQ7 559 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 PRSS41Q7RTY9 318 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 OR2L5Q8NG80 312 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 OR52B6Q8NGF0 335 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 ADAMTS17Q8TE56 1095 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 ZNF473Q8WTR7 871 aaKnown RBP14.21□□□□□ -0.13
RNF4-210ENST00000508235 APOBEC4Q8WW27 367 aaKnown RBP14.21□□□□□ -0.13
RNF4-210ENST00000508235 MS4A6EQ96DS6 147 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 CMTM7Q96FZ5 175 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 NSUN5Q96P11 429 aaKnown RBP14.21□□□□□ -0.13
RNF4-210ENST00000508235 TMEM237Q96Q45 408 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 OR1F2PQ96R84 312 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 SPSB2Q99619 263 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 ARHGAP9Q9BRR9 750 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 CENPHQ9H3R5 247 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 SOX17Q9H6I2 414 aaPredicted RBP14.21□□□□□ -0.13
RNF4-210ENST00000508235 MAN2B2Q9Y2E5 1009 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 CACNA1BQ00975 2339 aa14.21□□□□□ -0.13
RNF4-210ENST00000508235 PEX12O00623 359 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 ERI3O43414 337 aaKnown RBP14.2□□□□□ -0.14
RNF4-210ENST00000508235 CNOT3O75175 753 aaKnown RBP14.2□□□□□ -0.14
RNF4-210ENST00000508235 RDH16O75452 317 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 SMIM10L1P0DMW3 83 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 MMP11P24347 488 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 HNRNPH1P31943 449 aaKnown RBP14.2□□□□□ -0.14
RNF4-210ENST00000508235 OTX2P32243 289 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 CCR10P46092 362 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 ARFIP1P53367 373 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms