RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 STUB1Q9UNE7 303 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 KLHL20Q9Y2M5 609 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 NUP214P35658 2090 aaPredicted RBP17.08■□□□□ 0.32
NUP54-205ENST00000507257 SCN10AQ9Y5Y9 1956 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.08■□□□□ 0.32
NUP54-205ENST00000507257 A0A1B0GVM2 712 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 HYKKA2RU49 373 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 B4DXG7 233 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 SYN3O14994 580 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 RGS5O15539 181 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 PRAMEF12O95522 483 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 C8GP07360 202 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 ADRA2AP08913 450 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 CPN2P22792 545 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 CRYBB2P43320 205 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 ASMTP46597 345 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 SNRPGP62308 76 aaKnown RBP17.08■□□□□ 0.32
NUP54-205ENST00000507257 SPIBQ01892 262 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 ZNF177Q13360 481 aaPredicted RBP17.08■□□□□ 0.32
NUP54-205ENST00000507257 TNK1Q13470 666 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 PTGES3Q15185 160 aaKnown RBP17.08■□□□□ 0.32
NUP54-205ENST00000507257 PTPRRQ15256 657 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 EXOC3L2Q2M3D2 409 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 TMEM201Q5SNT2 666 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 CCNJQ5T5M9 372 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 MBOAT1Q6ZNC8 495 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 SERINC5Q86VE9 423 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 CLECL1Q8IZS7 167 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 CLDN19Q8N6F1 224 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 CLDN22Q8N7P3 220 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 VPS37AQ8NEZ2 397 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 SUN5Q8TC36 379 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 C11orf24Q96F05 449 aaPredicted RBP17.08■□□□□ 0.32
NUP54-205ENST00000507257 ZFYVE19Q96K21 471 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 DUSP26Q9BV47 211 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 ARHGAP39Q9C0H5 1083 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 IRF2BPLQ9H1B7 796 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 SYNDIG1Q9H7V2 258 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 RNF121Q9H920 327 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 TAS2R16Q9NYV7 291 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 ZNF282Q9UDV7 671 aaPredicted RBP17.08■□□□□ 0.32
NUP54-205ENST00000507257 NDOR1Q9UHB4 597 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 PCDHB9Q9Y5E1 797 aa17.08■□□□□ 0.32
NUP54-205ENST00000507257 AGAP14A8MT82 685 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 A8MV72 311 aaPredicted RBP17.07■□□□□ 0.32
NUP54-205ENST00000507257 CBX4O00257 560 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 SCAMP2O15127 329 aaKnown RBP17.07■□□□□ 0.32
NUP54-205ENST00000507257 TSPAN3O60637 253 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 IL1AP01583 271 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 CTSHP09668 335 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 NUDT7P0C024 238 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 HLA-EP13747 358 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 JUPP14923 745 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 ATF6P18850 670 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 AOAHP28039 575 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 RPS24P62847 133 aaKnown RBP17.07■□□□□ 0.32
NUP54-205ENST00000507257 FCHO2Q0JRZ9 810 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 NCF4Q15080 339 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 FAM92BQ6ZTR7 304 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 ZNF598Q86UK7 904 aaKnown RBP17.07■□□□□ 0.32
NUP54-205ENST00000507257 LAX1Q8IWV1 398 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 CBARPQ8N350 705 aaPredicted RBP17.07■□□□□ 0.32
NUP54-205ENST00000507257 PIH1D2Q8WWB5 315 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 REPS1Q96D71 796 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 MS4A4AQ96JQ5 239 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 CNPPD1Q9BV87 410 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 CCSER2Q9H7U1 834 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 NDUFB11Q9NX14 153 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 STMN3Q9NZ72 180 aa17.07■□□□□ 0.32
NUP54-205ENST00000507257 YY2O15391 372 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 NBNO60934 754 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 HSD3B1P14060 373 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 HSD3B2P26439 372 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 PTPN5P54829 565 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 DSC1Q08554 894 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 TWF1Q12792 350 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 FAPQ12884 760 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 LARS2Q15031 903 aaKnown RBP17.06■□□□□ 0.32
NUP54-205ENST00000507257 ZMAT1Q5H9K5 638 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 MORN1Q5T089 497 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 ZNF767PQ75MW2 155 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 C11orf74Q86VG3 221 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 FAM46DQ8NEK8 389 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 FBXO22Q8NEZ5 403 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 SLC25A46Q96AG3 418 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 MYO19Q96H55 970 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 ZC3HAV1LQ96H79 300 aaKnown RBP17.06■□□□□ 0.32
NUP54-205ENST00000507257 FYTTD1Q96QD9 318 aaKnown RBP17.06■□□□□ 0.32
NUP54-205ENST00000507257 ROGDIQ9GZN7 287 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 ZFYVE1Q9HBF4 777 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 IL26Q9NPH9 171 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 NUFIP1Q9UHK0 495 aaKnown RBP17.06■□□□□ 0.32
NUP54-205ENST00000507257 DNMT3LQ9UJW3 386 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 VPS4AQ9UN37 437 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 SATB2Q9UPW6 733 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 DSPPQ9NZW4 1301 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 OR6C75A6NL08 312 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 LAMP1P11279 417 aa17.06■□□□□ 0.32
NUP54-205ENST00000507257 HOXD11P31277 338 aaPredicted RBP17.06■□□□□ 0.32
NUP54-205ENST00000507257 CD52P31358 61 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms