RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 SPATA19Q7Z5L4 167 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 ADCK2Q7Z695 626 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 B3GNT8Q7Z7M8 397 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 MTDHQ86UE4 582 aaKnown RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 KMT5CQ86Y97 462 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 DDIASQ8IXT1 998 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.67□□□□□ -1.5
USP39-213ENST00000467885 KIAA2013Q8IYS2 634 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 SHISA5Q8N114 240 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 CACTIN-AS1Q8N1I8 211 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 METTL4Q8N3J2 472 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 AFAP1L2Q8N4X5 818 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 CPSF7Q8N684 471 aaKnown RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 C19orf47Q8N9M1 422 aaKnown RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 DEFB124Q8NES8 71 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 NUDT8Q8WV74 236 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 TM4SF18Q96CE8 201 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 TUBGCP3Q96CW5 907 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 REPS1Q96D71 796 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 MS4A6EQ96DS6 147 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 C19orf60Q96EN9 201 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 METTL2AQ96IZ6 378 aaKnown RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 FCRL1Q96LA6 429 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 PPP1R36Q96LQ0 422 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 TMEM74Q96NL1 305 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 QRFPRQ96P65 431 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 GFM1Q96RP9 751 aaKnown RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 SERPINI1Q99574 410 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 ZFYVE21Q9BQ24 234 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 SIKE1Q9BRV8 207 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 TMEM120AQ9BXJ8 343 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 SPRY4Q9C004 299 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 FAM107BQ9H098 131 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 MYLK2Q9H1R3 596 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 ZNF768Q9H5H4 540 aaKnown RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 ELOVL6Q9H5J4 265 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 ZNF385DQ9H6B1 395 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 PDE7BQ9NP56 450 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 SLC52A3Q9NQ40 469 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 DMRT3Q9NQL9 472 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 PFDN4Q9NQP4 134 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 SAR1AQ9NR31 198 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 STARD5Q9NSY2 213 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 C1orf109Q9NX04 203 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 OCIAD1Q9NX40 245 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 KCMF1Q9P0J7 381 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 KLHL3Q9UH77 587 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 BAIAP2L1Q9UHR4 511 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 EXO1Q9UQ84 846 aaKnown RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 ARL2BPQ9Y2Y0 163 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 MRPS2Q9Y399 296 aaKnown RBP5.67□□□□□ -1.5
USP39-213ENST00000467885 GPR45Q9Y5Y3 372 aa5.67□□□□□ -1.5
USP39-213ENST00000467885 OTOGLQ3ZCN5 2332 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 SPAARA0A1B0GVQ0 90 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 A0A1W2PNU3 283 aaPredicted RBP5.66□□□□□ -1.5
USP39-213ENST00000467885 FITM1A5D6W6 292 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 WASHC1A8K0Z3 465 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 C4orf51C9J302 202 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 SAP18O00422 153 aaKnown RBP5.66□□□□□ -1.5
USP39-213ENST00000467885 RTCAO00442 366 aaKnown RBP5.66□□□□□ -1.5
USP39-213ENST00000467885 NDUFAB1O14561 156 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 SLC30A4O14863 429 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 P2RX6O15547 441 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 FOXS1O43638 330 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 SH3BGRLO75368 114 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 EEDO75530 441 aaKnown RBP5.66□□□□□ -1.5
USP39-213ENST00000467885 SKAP2O75563 359 aaPredicted RBP5.66□□□□□ -1.5
USP39-213ENST00000467885 RSL1D1O76021 490 aaKnown RBP5.66□□□□□ -1.5
USP39-213ENST00000467885 CHEK2O96017 543 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 B3GALT4O96024 378 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 MT-CO3P00414 261 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 STATHP02808 62 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 ALDOCP09972 364 aaKnown RBP5.66□□□□□ -1.5
USP39-213ENST00000467885 T-ENOLP0DO92 83 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 BCKDHAP12694 445 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 CCL4P13236 92 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 CEACAM1P13688 526 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 LBPP18428 481 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 GPX3P22352 226 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 TACR1P25103 407 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 GSTM2P28161 218 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 TPP2P29144 1249 aaPredicted RBP5.66□□□□□ -1.5
USP39-213ENST00000467885 SERPINB1P30740 379 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 ZFP36L2P47974 494 aaKnown RBP5.66□□□□□ -1.5
USP39-213ENST00000467885 PDX1P52945 283 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 ARFIP1P53367 373 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 DIO3P55073 304 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 CLDN6P56747 220 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 VSX2P58304 361 aaPredicted RBP5.66□□□□□ -1.5
USP39-213ENST00000467885 CYP4F2P78329 520 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 MC2RQ01718 297 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 CSTF3Q12996 717 aaKnown RBP5.66□□□□□ -1.5
USP39-213ENST00000467885 TRA2AQ13595 282 aaKnown RBP eCLIP5.66□□□□□ -1.5
USP39-213ENST00000467885 DDX39BQ13838 428 aaKnown RBP5.66□□□□□ -1.5
USP39-213ENST00000467885 RUNX2Q13950 521 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 NAA25Q14CX7 972 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 C16orf72Q14CZ0 275 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 PRSS53Q2L4Q9 553 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 ISXQ2M1V0 245 aa5.66□□□□□ -1.5
USP39-213ENST00000467885 HKDC1Q2TB90 917 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms