RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 GLB1L3Q8NCI6 653 aaPredicted RBP16.12■□□□□ 0.17
SIPA1-201ENST00000394224 ABCB8Q9NUT2 735 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 NDRG4Q9ULP0 352 aaKnown RBP16.12■□□□□ 0.17
SIPA1-201ENST00000394224 ZNF236Q9UL36 1845 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 FAM220BPB1ANY3 271 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 ZNF623O75123 536 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 CH25HO95992 272 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 SOX6P35712 828 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 C10orf62Q5T681 223 aaPredicted RBP16.12■□□□□ 0.17
SIPA1-201ENST00000394224 USP50Q70EL3 339 aaPredicted RBP16.12■□□□□ 0.17
SIPA1-201ENST00000394224 MRPL10Q7Z7H8 261 aaKnown RBP16.12■□□□□ 0.17
SIPA1-201ENST00000394224 GALNT7Q86SF2 657 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 NXPE1Q8N323 547 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 TP53I13Q8NBR0 393 aaPredicted RBP16.12■□□□□ 0.17
SIPA1-201ENST00000394224 DOK4Q8TEW6 326 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 TADA1Q96BN2 335 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 VPS29Q9UBQ0 182 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 GPR52Q9Y2T5 361 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 CENPXA8MT69 81 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 F11P03951 625 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 GSTM1P09488 218 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 CD22P20273 847 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 TNFSF8P32971 234 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 CSTF3Q12996 717 aaKnown RBP16.12■□□□□ 0.17
SIPA1-201ENST00000394224 CRHR2Q13324 411 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 CBX2Q14781 532 aaPredicted RBP16.12■□□□□ 0.17
SIPA1-201ENST00000394224 BAK1Q16611 211 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 LRRC26Q2I0M4 334 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 ATAD3CQ5T2N8 411 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 CCDC80Q76M96 950 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 CCDC115Q96NT0 180 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 LHX3Q9UBR4 397 aa16.12■□□□□ 0.17
SIPA1-201ENST00000394224 TNS1Q9HBL0 1735 aaKnown RBP16.11■□□□□ 0.17
SIPA1-201ENST00000394224 DYTNA2CJ06 578 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 METTL15A6NJ78 407 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 FAM47E-STBD1D6RA91 191 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 GAPDHSO14556 408 aaPredicted RBP16.11■□□□□ 0.17
SIPA1-201ENST00000394224 NTN1O95631 604 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 HBA1P69905 142 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 PROX2Q3B8N5 592 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 GALNT12Q8IXK2 581 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 SYT14Q8NB59 555 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 NLGN4YQ8NFZ3 816 aaPredicted RBP16.11■□□□□ 0.17
SIPA1-201ENST00000394224 VMP1Q96GC9 406 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 ASPNQ9BXN1 380 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 RRAGCQ9HB90 399 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 TVP23BQ9NYZ1 205 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 AMD1P17707 334 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 XPAP23025 273 aaPredicted RBP16.11■□□□□ 0.17
SIPA1-201ENST00000394224 PDHA2P29803 388 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 TLE2Q04725 743 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 CLEC12AQ5QGZ9 265 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 GPRC6AQ5T6X5 926 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 BRAT1Q6PJG6 821 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 UPF1Q92900 1129 aaKnown RBP eCLIP16.11■□□□□ 0.17
SIPA1-201ENST00000394224 MYDGFQ969H8 173 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 SLC35A5Q9BS91 424 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 HOXD1Q9GZZ0 328 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 WNT9AO14904 365 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 DYRK3O43781 588 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 NUAK1O60285 661 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 SPAM1P38567 509 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 MLLT1Q03111 559 aaPredicted RBP16.11■□□□□ 0.17
SIPA1-201ENST00000394224 PTGES3Q15185 160 aaKnown RBP16.11■□□□□ 0.17
SIPA1-201ENST00000394224 PYDC2Q56P42 97 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 LYPD8Q6UX82 237 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 CHST14Q8NCH0 376 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 WRAP53Q9BUR4 548 aaKnown RBP16.11■□□□□ 0.17
SIPA1-201ENST00000394224 DNAJC11Q9NVH1 559 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 MOSPD1Q9UJG1 213 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 OSGIN1Q9UJX0 560 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 PCDHB1Q9Y5F3 818 aa16.11■□□□□ 0.17
SIPA1-201ENST00000394224 CLCA1A8K7I4 914 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 HYAL3O43820 417 aaPredicted RBP16.1■□□□□ 0.17
SIPA1-201ENST00000394224 SLC16A8O95907 504 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 RPS19P39019 145 aaKnown RBP16.1■□□□□ 0.17
SIPA1-201ENST00000394224 NRIP1P48552 1158 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 HOXC5Q00444 222 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 HSPB3Q12988 150 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 C22orf42Q6IC83 251 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 C1GALT1C1Q96EU7 318 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 FUBP3Q96I24 572 aaKnown RBP eCLIP16.1■□□□□ 0.17
SIPA1-201ENST00000394224 RDH12Q96NR8 316 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 IL17FQ96PD4 163 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 TAS2R9Q9NYW1 312 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 NDUFAF4Q9P032 175 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 WDR90Q96KV7 1748 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 DOCK6Q96HP0 2047 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 GLOD5A6NK44 160 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 CDRT1O95170 752 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 KLK1P06870 262 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 ETV3P41162 512 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 RAB8AP61006 207 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 INSL4Q14641 139 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 CAPN13Q6MZZ7 669 aaPredicted RBP16.1■□□□□ 0.17
SIPA1-201ENST00000394224 TCEANCQ8N8B7 351 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 NACC2Q96BF6 587 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 DIRAS2Q96HU8 199 aa16.1■□□□□ 0.17
SIPA1-201ENST00000394224 POLR2J2Q9GZM3 115 aaKnown RBP16.1■□□□□ 0.17
SIPA1-201ENST00000394224 TET1Q8NFU7 2136 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms