RNA–Protein interactions for RNA: ENST00000273482.10

TRPC1-201, Transcript of transient receptor potential cation channel subfamily C member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPC1, Length 4,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1-201ENST00000273482 BEND5Q7L4P6 421 aa16.52■□□□□ 0.24
TRPC1-201ENST00000273482 CDK20Q8IZL9 346 aa16.52■□□□□ 0.24
TRPC1-201ENST00000273482 OR10G6Q8NH81 332 aa16.52■□□□□ 0.24
TRPC1-201ENST00000273482 XAGE5Q8WWM1 108 aa16.52■□□□□ 0.24
TRPC1-201ENST00000273482 TP53INP1Q96A56 240 aa16.52■□□□□ 0.24
TRPC1-201ENST00000273482 COL26A1Q96A83 441 aa16.52■□□□□ 0.24
TRPC1-201ENST00000273482 BARD1Q99728 777 aaKnown RBP16.52■□□□□ 0.24
TRPC1-201ENST00000273482 POLR2J3Q9H1A7 115 aaKnown RBP16.52■□□□□ 0.24
TRPC1-201ENST00000273482 SLC32A1Q9H598 525 aa16.52■□□□□ 0.24
TRPC1-201ENST00000273482 TBC1D17Q9HA65 648 aa16.52■□□□□ 0.24
TRPC1-201ENST00000273482 TREX1Q9NSU2 369 aa16.52■□□□□ 0.24
TRPC1-201ENST00000273482 CLEC4AQ9UMR7 237 aa16.52■□□□□ 0.24
TRPC1-201ENST00000273482 SMIM30A4D0T7 59 aa16.52■□□□□ 0.23
TRPC1-201ENST00000273482 CACNB4O00305 520 aaPredicted RBP16.52■□□□□ 0.23
TRPC1-201ENST00000273482 PGRMC2O15173 223 aa16.52■□□□□ 0.23
TRPC1-201ENST00000273482 EN2P19622 333 aaPredicted RBP16.52■□□□□ 0.23
TRPC1-201ENST00000273482 ZDHHC20Q5W0Z9 365 aa16.52■□□□□ 0.23
TRPC1-201ENST00000273482 FRG2Q64ET8 278 aa16.52■□□□□ 0.23
TRPC1-201ENST00000273482 PRSS48Q7RTY5 328 aa16.52■□□□□ 0.23
TRPC1-201ENST00000273482 NARS2Q96I59 477 aaKnown RBP16.52■□□□□ 0.23
TRPC1-201ENST00000273482 FRG2BQ96QU4 278 aa16.52■□□□□ 0.23
TRPC1-201ENST00000273482 SLC22A12Q96S37 553 aa16.52■□□□□ 0.23
TRPC1-201ENST00000273482 POU2F3Q9UKI9 436 aa16.52■□□□□ 0.23
TRPC1-201ENST00000273482 OAS3Q9Y6K5 1087 aaKnown RBP16.52■□□□□ 0.23
TRPC1-201ENST00000273482 WNT9AO14904 365 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 CDRT1O95170 752 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 SLC2A2P11168 524 aaPredicted RBP16.51■□□□□ 0.23
TRPC1-201ENST00000273482 BCKDHAP12694 445 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 TSPYL5Q86VY4 417 aaPredicted RBP16.51■□□□□ 0.23
TRPC1-201ENST00000273482 HDDC3Q8N4P3 179 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 OR6Q1Q8NGQ2 317 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 NLE1Q9NVX2 485 aaPredicted RBP16.51■□□□□ 0.23
TRPC1-201ENST00000273482 RPL36Q9Y3U8 105 aaKnown RBP16.51■□□□□ 0.23
TRPC1-201ENST00000273482 PRKAB1Q9Y478 270 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 EBLN1P0CF75 366 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 ARCN1P48444 511 aaKnown RBP16.51■□□□□ 0.23
TRPC1-201ENST00000273482 MYLIPQ8WY64 445 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 PEX13Q92968 403 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 UBE2E3Q969T4 207 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 SLCO4A1Q96BD0 722 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 MGLLQ99685 303 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 MROQ9BYG7 248 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 VPS29Q9UBQ0 182 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 STOML2Q9UJZ1 356 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 PRAMEF33A0A0G2JMD5 474 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 KIAA0513O60268 411 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 PRAMEF10O60809 474 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 VMACQ2NL98 169 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 GPR33Q49SQ1 333 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 KLHL6Q8WZ60 621 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 RBM38Q9H0Z9 239 aaKnown RBP16.51■□□□□ 0.23
TRPC1-201ENST00000273482 ZNF282Q9UDV7 671 aaPredicted RBP16.51■□□□□ 0.23
TRPC1-201ENST00000273482 MMP20O60882 483 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 GJB3O75712 270 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 HNRNPFP52597 415 aaKnown RBP16.51■□□□□ 0.23
TRPC1-201ENST00000273482 OR8H3Q8N146 312 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 KCNN1Q92952 543 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 RIPOR3Q96MK2 946 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 MS4A12Q9NXJ0 267 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 IL36AQ9UHA7 158 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 SLC22A14Q9Y267 594 aa16.51■□□□□ 0.23
TRPC1-201ENST00000273482 TMX2-CTNND1H3BSU7 103 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 NME6O75414 186 aaPredicted RBP16.5■□□□□ 0.23
TRPC1-201ENST00000273482 LEFTY1O75610 366 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 GSRP00390 522 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 CSTF2P33240 577 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRPC1-201ENST00000273482 GRSF1Q12849 480 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRPC1-201ENST00000273482 HKDC1Q2TB90 917 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 VTCN1Q7Z7D3 282 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 HERVK_113Q902F9 699 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 TCEAL4Q96EI5 215 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 SPATA5L1Q9BVQ7 753 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 TRMT61BQ9BVS5 477 aaKnown RBP16.5■□□□□ 0.23
TRPC1-201ENST00000273482 SLC29A3Q9BZD2 475 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 PCDHGB6Q9Y5F9 930 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 SCN1AP35498 2009 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 SMAD6O43541 496 aaKnown RBP16.5■□□□□ 0.23
TRPC1-201ENST00000273482 TPST2O60704 377 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 PSAPL1Q6NUJ1 521 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 RSPO2Q6UXX9 243 aaPredicted RBP16.5■□□□□ 0.23
TRPC1-201ENST00000273482 RHOXF1Q8NHV9 184 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 RPL3LQ92901 407 aaKnown RBP16.5■□□□□ 0.23
TRPC1-201ENST00000273482 KCTD7Q96MP8 289 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 PKP4Q99569 1192 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 IFT52Q9Y366 437 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 PCDHB14Q9Y5E9 798 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 HSPE1-MOB4S4R3N1 261 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 A0A096LPI6 279 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 HHLA1C9JL84 531 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 B4GALT3O60512 393 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 MYL9P24844 172 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 HNF1BP35680 557 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 FAM189BP81408 668 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 E2F2Q14209 437 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 GPAT3Q53EU6 434 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 CAPN13Q6MZZ7 669 aaPredicted RBP16.5■□□□□ 0.23
TRPC1-201ENST00000273482 NETO1Q8TDF5 533 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 LINC01599Q8WXQ3 324 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 QRFPRQ96P65 431 aa16.5■□□□□ 0.23
TRPC1-201ENST00000273482 PCDHA9Q9Y5H5 950 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms