RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 ERI3O43414 337 aaKnown RBP12.07□□□□□ -0.48
UBXN4-201ENST00000272638 CD247P20963 164 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 NTSP30990 170 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 PCYT1AP49585 367 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 PHC1P78364 1004 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 NFATC3Q12968 1075 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 DPY19L1Q2PZI1 675 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 TMEM179BQ7Z7N9 219 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 CPA6Q8N4T0 437 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 CAMKK1Q8N5S9 505 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 DPP10Q8N608 796 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 RPL3LQ92901 407 aaKnown RBP12.07□□□□□ -0.48
UBXN4-201ENST00000272638 FAM120CQ9NX05 1096 aaKnown RBP12.07□□□□□ -0.48
UBXN4-201ENST00000272638 DNAJC27Q9NZQ0 273 aa12.07□□□□□ -0.48
UBXN4-201ENST00000272638 OR52A4PA6NMU1 304 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 EFCAB9A8MZ26 197 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 RPN2P04844 631 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 EPHA2P29317 976 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 GDI1P31150 447 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 MLLT10P55197 1068 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 LASP1Q14847 261 aaKnown RBP12.06□□□□□ -0.48
UBXN4-201ENST00000272638 UGT8Q16880 541 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 ZC3H12BQ5HYM0 836 aaKnown RBP12.06□□□□□ -0.48
UBXN4-201ENST00000272638 C16orf62Q7Z3J2 963 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 TRAM1L1Q8N609 369 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 SLC5A8Q8N695 610 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 PDLIM5Q96HC4 596 aaKnown RBP12.06□□□□□ -0.48
UBXN4-201ENST00000272638 KXD1Q9BQD3 176 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 EFCAB11Q9BUY7 163 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 C8orf4Q9NR00 106 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 FBXO10Q9UK96 956 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 BTBD3Q9Y2F9 522 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 PCDHB11Q9Y5F2 797 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 BRWD1Q9NSI6 2320 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 ZNF860A6NHJ4 632 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 FAM227AF5H4B4 570 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 MYL12BO14950 172 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 ADAMDEC1O15204 470 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 GNRH1P01148 92 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 CKMT1AP12532 417 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 PPIBP23284 216 aaKnown RBP12.06□□□□□ -0.48
UBXN4-201ENST00000272638 CSNK1DP48730 415 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 MLLT1Q03111 559 aaPredicted RBP12.06□□□□□ -0.48
UBXN4-201ENST00000272638 GPM6BQ13491 265 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 EXOC3L2Q2M3D2 409 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 PARGQ86W56 976 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 CLN6Q9NWW5 311 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 DPP7Q9UHL4 492 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 TMED5Q9Y3A6 229 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 MKI67P46013 3256 aaKnown RBP12.06□□□□□ -0.48
UBXN4-201ENST00000272638 LAMA3Q16787 3333 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 A0A0J9YVX5 310 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 PIPSLA2A3N6 862 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 C9P02748 559 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 C1GALT1C1LP0DN25 315 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 C21orf33P30042 268 aaPredicted RBP12.06□□□□□ -0.48
UBXN4-201ENST00000272638 TIGD6Q17RP2 521 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 TMEM31Q5JXX7 168 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 RBM48Q5RL73 367 aaKnown RBP12.06□□□□□ -0.48
UBXN4-201ENST00000272638 MFSD4BQ5TF39 518 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 ZNF852Q6ZMS4 543 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 KRT73Q86Y46 540 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 CROCCP3Q8IVE0 287 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 SPARTQ8N0X7 666 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 C10orf111Q8N326 155 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 CBARPQ8N350 705 aaPredicted RBP12.06□□□□□ -0.48
UBXN4-201ENST00000272638 SLC15A4Q8N697 577 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 GAB3Q8WWW8 586 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 MYDGFQ969H8 173 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 REEP4Q9H6H4 257 aa12.06□□□□□ -0.48
UBXN4-201ENST00000272638 KPNA4O00629 521 aaPredicted RBP12.05□□□□□ -0.48
UBXN4-201ENST00000272638 PDPK1O15530 556 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 ETHE1O95571 254 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 STSP08842 583 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 ITGA2P17301 1181 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 CDH3P22223 829 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 PTPN5P54829 565 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 DSTNP60981 165 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 HBA1P69905 142 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 SLC7A9P82251 487 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 MRPS15P82914 257 aaKnown RBP12.05□□□□□ -0.48
UBXN4-201ENST00000272638 SPIN4Q56A73 249 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 SPANXN2Q5MJ10 180 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 KIAA1614Q5VZ46 1190 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 LIPJQ5W064 366 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 WDR53Q7Z5U6 358 aaPredicted RBP12.05□□□□□ -0.48
UBXN4-201ENST00000272638 CHDHQ8NE62 594 aaPredicted RBP12.05□□□□□ -0.48
UBXN4-201ENST00000272638 TM9SF3Q9HD45 589 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 ABCB9Q9NP78 766 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 CLDN25C9JDP6 229 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 H0YAE9 185 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 H0YJX3 145 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 NUAK1O60285 661 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 CCNB2O95067 398 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 RASGRP1O95267 797 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 CXCR2P25025 360 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 IMPA1P29218 277 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 AVPR1BP47901 424 aa12.05□□□□□ -0.48
UBXN4-201ENST00000272638 NCBP2P52298 156 aaKnown RBP eCLIP12.05□□□□□ -0.481e-8■□□□□ 9.5
UBXN4-201ENST00000272638 CDK5R2Q13319 367 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms