RNA–Protein interactions for RNA: YNL171C

YNL171C, Transcript of Dubious open reading frame, yeast

Gene YNL171C, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YNL171C	YNL171C	RGD1	P38339	666 aa		5.91	□□□□□ -1.46
YNL171C	YNL171C	RPN3	P40016	523 aa	Known RBP	5.91	□□□□□ -1.46
YNL171C	YNL171C	YLR225C	Q05948	407 aa	Known RBP	5.91	□□□□□ -1.46
YNL171C	YNL171C	RIB2	Q12362	591 aa	Known RBP	5.91	□□□□□ -1.46
YNL171C	YNL171C	CMP2	P14747	604 aa		5.9	□□□□□ -1.46
YNL171C	YNL171C	GRX1	P25373	110 aa	Known RBP	5.9	□□□□□ -1.46
YNL171C	YNL171C	MLS1	P30952	554 aa		5.9	□□□□□ -1.46
YNL171C	YNL171C	ABD1	P32783	436 aa	Predicted RBP	5.9	□□□□□ -1.46
YNL171C	YNL171C	YKL069W	P36088	180 aa		5.9	□□□□□ -1.46
YNL171C	YNL171C	YPL260W	Q08977	551 aa		5.9	□□□□□ -1.46
YNL171C	YNL171C	PNS1	Q12412	539 aa		5.9	□□□□□ -1.46
YNL171C	YNL171C	RKM4	Q12504	494 aa		5.9	□□□□□ -1.46
YNL171C	YNL171C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.89	□□□□□ -1.47	not detected
YNL171C	YNL171C	AGP1	P25376	633 aa		5.89	□□□□□ -1.47
YNL171C	YNL171C	YKL107W	P34251	309 aa		5.89	□□□□□ -1.47
YNL171C	YNL171C	SNF7	P39929	240 aa	Known RBP	5.89	□□□□□ -1.47
YNL171C	YNL171C	SPF1	P39986	1215 aa	Known RBP	5.89	□□□□□ -1.47
YNL171C	YNL171C	MPH1	P40562	993 aa		5.89	□□□□□ -1.47
YNL171C	YNL171C	CDC20	P26309	610 aa		5.88	□□□□□ -1.47
YNL171C	YNL171C	SBA1	P28707	216 aa	Known RBP	5.88	□□□□□ -1.47
YNL171C	YNL171C	OCA5	P38738	679 aa		5.88	□□□□□ -1.47
YNL171C	YNL171C	YGL176C	P46945	554 aa		5.88	□□□□□ -1.47
YNL171C	YNL171C	YJL049W	P47048	450 aa		5.88	□□□□□ -1.47
YNL171C	YNL171C	RSM24	Q03976	319 aa		5.88	□□□□□ -1.47
YNL171C	YNL171C	ESC2	Q06340	456 aa		5.88	□□□□□ -1.47
YNL171C	YNL171C	CDC6	P09119	513 aa		5.87	□□□□□ -1.47
YNL171C	YNL171C	DOM34	P33309	386 aa		5.87	□□□□□ -1.47
YNL171C	YNL171C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.87	□□□□□ -1.47	not detected
YNL171C	YNL171C	TMA10	Q06177	86 aa		5.87	□□□□□ -1.47
YNL171C	YNL171C	YER152C	P10356	443 aa		5.86	□□□□□ -1.47
YNL171C	YNL171C	LST4	P34239	828 aa		5.86	□□□□□ -1.47
YNL171C	YNL171C	VBA5	P36172	582 aa		5.86	□□□□□ -1.47
YNL171C	YNL171C	RFC5	P38251	354 aa		5.86	□□□□□ -1.47
YNL171C	YNL171C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.86	□□□□□ -1.47	not detected
YNL171C	YNL171C	NAN1	Q02931	896 aa	Known RBP	5.86	□□□□□ -1.47
YNL171C	YNL171C	SHE9	Q04172	456 aa		5.86	□□□□□ -1.47
YNL171C	YNL171C	PUS9	Q12069	462 aa		5.86	□□□□□ -1.47
YNL171C	YNL171C	GNT1	Q12096	491 aa		5.86	□□□□□ -1.47
YNL171C	YNL171C	YOL098C	Q12496	1037 aa		5.86	□□□□□ -1.47
YNL171C	YNL171C	TRM2	P33753	639 aa		5.85	□□□□□ -1.47
YNL171C	YNL171C	MRP8	P35719	219 aa		5.85	□□□□□ -1.47
YNL171C	YNL171C	SLI1	P53304	468 aa		5.85	□□□□□ -1.47
YNL171C	YNL171C	ACK1	Q07622	623 aa	Predicted RBP	5.85	□□□□□ -1.47
YNL171C	YNL171C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.85	□□□□□ -1.47	not detected
YNL171C	YNL171C	GPB1	Q08886	897 aa		5.85	□□□□□ -1.47
YNL171C	YNL171C	YPL066W	Q12194	479 aa		5.85	□□□□□ -1.47
YNL171C	YNL171C	TAD3	Q9URQ3	322 aa		5.85	□□□□□ -1.47
YNL171C	YNL171C	SPP382	Q06411	708 aa	Predicted RBP	5.84	□□□□□ -1.47
YNL171C	YNL171C	RAD4	P14736	754 aa		5.83	□□□□□ -1.48
YNL171C	YNL171C	SRP40	P32583	406 aa	Predicted RBP	5.83	□□□□□ -1.48
YNL171C	YNL171C	YBR184W	P38299	523 aa		5.83	□□□□□ -1.48
YNL171C	YNL171C	IRR1	P40541	1150 aa		5.83	□□□□□ -1.48
YNL171C	YNL171C	MCM6	P53091	1017 aa	Known RBP	5.83	□□□□□ -1.48
YNL171C	YNL171C	RXT3	Q07458	294 aa		5.83	□□□□□ -1.48
YNL171C	YNL171C	SVS1	Q12254	260 aa		5.83	□□□□□ -1.48
YNL171C	YNL171C	YTA7	P40340	1379 aa		5.82	□□□□□ -1.48
YNL171C	YNL171C	HCM1	P25364	564 aa		5.82	□□□□□ -1.48
YNL171C	YNL171C	TIM54	P47045	478 aa		5.82	□□□□□ -1.48
YNL171C	YNL171C	GTF1	P53260	183 aa	Predicted RBP	5.82	□□□□□ -1.48
YNL171C	YNL171C	SUN4	P53616	420 aa		5.82	□□□□□ -1.48
YNL171C	YNL171C	NSE3	Q05541	303 aa		5.82	□□□□□ -1.48
YNL171C	YNL171C	SPO75	Q07798	868 aa		5.82	□□□□□ -1.48
YNL171C	YNL171C	APL1	P27351	700 aa		5.81	□□□□□ -1.48
YNL171C	YNL171C	STE5	P32917	917 aa		5.81	□□□□□ -1.48
YNL171C	YNL171C	PBY1	P38254	753 aa		5.81	□□□□□ -1.48
YNL171C	YNL171C	MBP1	P39678	833 aa		5.81	□□□□□ -1.48
YNL171C	YNL171C	MSE1	P48525	536 aa		5.81	□□□□□ -1.48
YNL171C	YNL171C	MNN10	P50108	393 aa	Known RBP	5.81	□□□□□ -1.48
YNL171C	YNL171C	YAP6	Q03935	383 aa		5.81	□□□□□ -1.48
YNL171C	YNL171C	CDC53	Q12018	815 aa	Known RBP	5.81	□□□□□ -1.48
YNL171C	YNL171C	RPL11A	P0C0W9	174 aa	Known RBP	5.8	□□□□□ -1.48
YNL171C	YNL171C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.8	□□□□□ -1.48	not detected
YNL171C	YNL171C	SIP5	P40210	489 aa	Known RBP	5.8	□□□□□ -1.48
YNL171C	YNL171C	IOC3	P43596	787 aa		5.8	□□□□□ -1.48
YNL171C	YNL171C	GCV2	P49095	1034 aa		5.8	□□□□□ -1.48
YNL171C	YNL171C	PHO23	P50947	330 aa		5.8	□□□□□ -1.48
YNL171C	YNL171C	VPS62	P53285	467 aa		5.8	□□□□□ -1.48
YNL171C	YNL171C	OSH2	Q12451	1283 aa		5.8	□□□□□ -1.48
YNL171C	YNL171C	RPL11B	Q3E757	174 aa	Predicted RBP	5.8	□□□□□ -1.48
YNL171C	YNL171C	STE11	P23561	717 aa		5.79	□□□□□ -1.48
YNL171C	YNL171C	YKL091C	P33324	310 aa	Known RBP	5.79	□□□□□ -1.48
YNL171C	YNL171C	PNT1	P38969	423 aa		5.79	□□□□□ -1.48
YNL171C	YNL171C	MXR1	P40029	184 aa		5.79	□□□□□ -1.48
YNL171C	YNL171C	HUL5	P53119	910 aa		5.79	□□□□□ -1.48
YNL171C	YNL171C	ORC1	P54784	914 aa	Predicted RBP	5.79	□□□□□ -1.48
YNL171C	YNL171C	NTO1	Q12311	748 aa		5.79	□□□□□ -1.48
YNL171C	YNL171C	YOR131C	Q12486	218 aa		5.79	□□□□□ -1.48
YNL171C	YNL171C	KIN2	P13186	1147 aa	Known RBP	5.78	□□□□□ -1.48
YNL171C	YNL171C	EMC1	P25574	760 aa		5.78	□□□□□ -1.48
YNL171C	YNL171C	GEM1	P39722	662 aa		5.78	□□□□□ -1.48
YNL171C	YNL171C	SIZ1	Q04195	904 aa		5.78	□□□□□ -1.48
YNL171C	YNL171C	YLR224W	Q05947	369 aa		5.78	□□□□□ -1.48
YNL171C	YNL171C	BDF2	Q07442	638 aa		5.78	□□□□□ -1.48
YNL171C	YNL171C	PRP9	P19736	530 aa	Known RBP	5.77	□□□□□ -1.49
YNL171C	YNL171C	DBP2	P24783	546 aa	Known RBP	5.77	□□□□□ -1.49
YNL171C	YNL171C	RPL8B	P29453	256 aa	Known RBP	5.77	□□□□□ -1.49
YNL171C	YNL171C	YGR125W	P53273	1036 aa		5.77	□□□□□ -1.49
YNL171C	YNL171C	PBP1	P53297	722 aa	Known RBP	5.77	□□□□□ -1.49
YNL171C	YNL171C	EAF1	Q06337	982 aa		5.77	□□□□□ -1.49
YNL171C	YNL171C	FMP25	Q08023	583 aa		5.77	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms