RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C THS1P04801 734 aaKnown RBP6.41□□□□□ -1.38
RPF2YKR081C PRE10P21242 288 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
RPF2YKR081C UGA2P38067 497 aa6.41□□□□□ -1.38
RPF2YKR081C RSM24Q03976 319 aa6.41□□□□□ -1.38
RPF2YKR081C SVS1Q12254 260 aa6.41□□□□□ -1.38
RPF2YKR081C DBP2P24783 546 aaKnown RBP6.4□□□□□ -1.38
RPF2YKR081C SLA2P33338 968 aa6.4□□□□□ -1.38
RPF2YKR081C PIN4P34217 668 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
RPF2YKR081C ABZ1P37254 787 aaPredicted RBP6.4□□□□□ -1.38
RPF2YKR081C MPT5P39016 859 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
RPF2YKR081C AGP1P25376 633 aa6.39□□□□□ -1.39
RPF2YKR081C SBA1P28707 216 aaKnown RBP6.39□□□□□ -1.39
RPF2YKR081C ABD1P32783 436 aaPredicted RBP6.39□□□□□ -1.39
RPF2YKR081C GCN5Q03330 439 aa6.39□□□□□ -1.39
RPF2YKR081C KIN2P13186 1147 aaKnown RBP6.38□□□□□ -1.39
RPF2YKR081C TAT2P38967 592 aa6.38□□□□□ -1.39
RPF2YKR081C VAC8P39968 578 aa6.38□□□□□ -1.39
RPF2YKR081C SIP5P40210 489 aaKnown RBP6.38□□□□□ -1.39
RPF2YKR081C RRT14P40470 206 aa6.38□□□□□ -1.39
RPF2YKR081C ALD6P54115 500 aaKnown RBP6.38□□□□□ -1.39
RPF2YKR081C GSF2Q04697 403 aaKnown RBP6.38□□□□□ -1.39
RPF2YKR081C ESC2Q06340 456 aa6.38□□□□□ -1.39
RPF2YKR081C OPI10Q08202 246 aa6.38□□□□□ -1.39
RPF2YKR081C TUB2P02557 457 aaKnown RBP6.37□□□□□ -1.39
RPF2YKR081C BI4P03879 638 aa6.37□□□□□ -1.39
RPF2YKR081C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
RPF2YKR081C CMP2P14747 604 aa6.36□□□□□ -1.39
RPF2YKR081C ACE2P21192 770 aa6.36□□□□□ -1.39
RPF2YKR081C NOP7P53261 605 aaKnown RBP6.36□□□□□ -1.39
RPF2YKR081C APL1P27351 700 aa6.35□□□□□ -1.39
RPF2YKR081C CTS1P29029 562 aa6.35□□□□□ -1.39
RPF2YKR081C PLB2Q03674 706 aa6.35□□□□□ -1.39
RPF2YKR081C YDR132CQ03900 495 aa6.35□□□□□ -1.39
RPF2YKR081C SHE9Q04172 456 aa6.35□□□□□ -1.39
RPF2YKR081C SIZ1Q04195 904 aa6.35□□□□□ -1.39
RPF2YKR081C RIB2Q12362 591 aaKnown RBP6.35□□□□□ -1.39
RPF2YKR081C PRI2P20457 528 aa6.34□□□□□ -1.39
RPF2YKR081C GAL10P04397 699 aa6.33□□□□□ -1.4
RPF2YKR081C YKL069WP36088 180 aa6.33□□□□□ -1.4
RPF2YKR081C YLL058WQ12198 575 aa6.33□□□□□ -1.4
RPF2YKR081C VBA5P36172 582 aa6.32□□□□□ -1.4
RPF2YKR081C PBP1P53297 722 aaKnown RBP6.32□□□□□ -1.4
RPF2YKR081C RXT3Q07458 294 aa6.32□□□□□ -1.4
RPF2YKR081C SRM1P21827 482 aa6.31□□□□□ -1.4
RPF2YKR081C MRP8P35719 219 aa6.31□□□□□ -1.4
RPF2YKR081C MBP1P39678 833 aa6.31□□□□□ -1.4
RPF2YKR081C HFM1P51979 1187 aa6.31□□□□□ -1.4
RPF2YKR081C MTC3P53077 123 aa6.31□□□□□ -1.4
RPF2YKR081C MSC2Q03455 724 aa6.31□□□□□ -1.4
RPF2YKR081C HRQ1Q05549 1077 aa6.31□□□□□ -1.4
RPF2YKR081C VTS1Q08831 523 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
RPF2YKR081C PNS1Q12412 539 aa6.31□□□□□ -1.4
RPF2YKR081C YKL151CP36059 337 aa6.3□□□□□ -1.4
RPF2YKR081C SPF1P39986 1215 aaKnown RBP6.3□□□□□ -1.4
RPF2YKR081C DOM34P33309 386 aa6.29□□□□□ -1.4
RPF2YKR081C SRP1Q02821 542 aaKnown RBP6.29□□□□□ -1.4
RPF2YKR081C DUS4Q06063 367 aa6.29□□□□□ -1.4
RPF2YKR081C TDA5Q06417 326 aaKnown RBP6.29□□□□□ -1.4
RPF2YKR081C MDM38Q08179 573 aa6.29□□□□□ -1.4
RPF2YKR081C GPB1Q08886 897 aa6.29□□□□□ -1.4
RPF2YKR081C PBY1P38254 753 aa6.28□□□□□ -1.4
RPF2YKR081C SAH1P39954 449 aaKnown RBP6.28□□□□□ -1.4
RPF2YKR081C GTF1P53260 183 aaPredicted RBP6.28□□□□□ -1.4
RPF2YKR081C ACK1Q07622 623 aaPredicted RBP6.28□□□□□ -1.4
RPF2YKR081C WRS1Q12109 432 aaKnown RBP6.28□□□□□ -1.4
RPF2YKR081C OSW2Q12202 724 aa6.28□□□□□ -1.4
RPF2YKR081C CDC12P32468 407 aaKnown RBP6.27□□□□□ -1.41
RPF2YKR081C IRR1P40541 1150 aa6.27□□□□□ -1.41
RPF2YKR081C SSF2Q12153 453 aaPredicted RBP6.27□□□□□ -1.41
RPF2YKR081C CDC20P26309 610 aa6.26□□□□□ -1.41
RPF2YKR081C FUN30P31380 1131 aa6.26□□□□□ -1.41
RPF2YKR081C TRM2P33753 639 aa6.26□□□□□ -1.41
RPF2YKR081C YAP1801P38856 637 aa6.26□□□□□ -1.41
RPF2YKR081C GUS1P46655 708 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
RPF2YKR081C MCM6P53091 1017 aaKnown RBP6.26□□□□□ -1.41
RPF2YKR081C SRT1Q03175 343 aa6.26□□□□□ -1.41
RPF2YKR081C DUS3Q06053 668 aaKnown RBP6.26□□□□□ -1.41
RPF2YKR081C TMA10Q06177 86 aa6.25□□□□□ -1.41
RPF2YKR081C XYL2Q07993 356 aa6.25□□□□□ -1.41
RPF2YKR081C GIC1P38785 314 aa6.24□□□□□ -1.41
RPF2YKR081C YDR306CQ06640 478 aa6.24□□□□□ -1.41
RPF2YKR081C PRP9P19736 530 aaKnown RBP6.23□□□□□ -1.41
RPF2YKR081C HCM1P25364 564 aa6.23□□□□□ -1.41
RPF2YKR081C STE5P32917 917 aa6.23□□□□□ -1.41
RPF2YKR081C ZRG8P40021 1076 aa6.23□□□□□ -1.41
RPF2YKR081C MND2P40577 368 aa6.23□□□□□ -1.41
RPF2YKR081C GCV2P49095 1034 aa6.23□□□□□ -1.41
RPF2YKR081C MNN10P50108 393 aaKnown RBP6.23□□□□□ -1.41
RPF2YKR081C TPO2P53283 614 aa6.23□□□□□ -1.41
RPF2YKR081C CDC6P09119 513 aa6.22□□□□□ -1.41
RPF2YKR081C GRX1P25373 110 aaKnown RBP6.22□□□□□ -1.41
RPF2YKR081C PPH3P32345 308 aa6.22□□□□□ -1.41
RPF2YKR081C LST4P34239 828 aa6.22□□□□□ -1.41
RPF2YKR081C ECM21P38167 1117 aaKnown RBP6.22□□□□□ -1.41
RPF2YKR081C YBR184WP38299 523 aa6.22□□□□□ -1.41
RPF2YKR081C VPS62P53285 467 aa6.22□□□□□ -1.41
RPF2YKR081C NAN1Q02931 896 aaKnown RBP6.22□□□□□ -1.41
RPF2YKR081C ENA1P13587 1091 aa6.21□□□□□ -1.42
RPF2YKR081C RPC82P32349 654 aa6.21□□□□□ -1.42
RPF2YKR081C SCT1P32784 759 aa6.21□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms