RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A MAP1Q01662 387 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
VMA9YCL005W-A DUS3Q06053 668 aaKnown RBP2.9□□□□□ -1.95
VMA9YCL005W-A URN1Q06525 465 aaKnown RBP2.9□□□□□ -1.95
VMA9YCL005W-A RSC58Q07979 502 aa2.9□□□□□ -1.95
VMA9YCL005W-A MED7Q08278 222 aa2.9□□□□□ -1.95
VMA9YCL005W-A FLC1Q08967 793 aa2.9□□□□□ -1.95
VMA9YCL005W-A CIT1P00890 479 aa2.89□□□□□ -1.95
VMA9YCL005W-A NPP1P25353 742 aa2.89□□□□□ -1.95
VMA9YCL005W-A TIM23P32897 222 aa2.89□□□□□ -1.95
VMA9YCL005W-A AFR1P33304 620 aa2.89□□□□□ -1.95
VMA9YCL005W-A MDL2P33311 773 aa2.89□□□□□ -1.95
VMA9YCL005W-A BET3P36149 193 aa2.89□□□□□ -1.95
VMA9YCL005W-A PIK1P39104 1066 aa2.89□□□□□ -1.95
VMA9YCL005W-A IRR1P40541 1150 aa2.89□□□□□ -1.95
VMA9YCL005W-A BUD6P41697 788 aa2.89□□□□□ -1.95
VMA9YCL005W-A GUS1P46655 708 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
VMA9YCL005W-A HFM1P51979 1187 aa2.89□□□□□ -1.95
VMA9YCL005W-A YGR125WP53273 1036 aa2.89□□□□□ -1.95
VMA9YCL005W-A BRE4Q07660 1125 aa2.89□□□□□ -1.95
VMA9YCL005W-A XYL2Q07993 356 aa2.89□□□□□ -1.95
VMA9YCL005W-A ACM1Q08981 209 aa2.89□□□□□ -1.95
VMA9YCL005W-A RIB2Q12362 591 aaKnown RBP2.89□□□□□ -1.95
VMA9YCL005W-A AIM44Q99299 758 aa2.89□□□□□ -1.95
VMA9YCL005W-A STI1P15705 589 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
VMA9YCL005W-A ARE1P25628 610 aa2.88□□□□□ -1.95
VMA9YCL005W-A CDC12P32468 407 aaKnown RBP2.88□□□□□ -1.95
VMA9YCL005W-A LIP5P32875 414 aa2.88□□□□□ -1.95
VMA9YCL005W-A HSP78P33416 811 aa2.88□□□□□ -1.95
VMA9YCL005W-A LRG1P35688 1017 aa2.88□□□□□ -1.95
VMA9YCL005W-A OMA1P36163 345 aa2.88□□□□□ -1.95
VMA9YCL005W-A CCZ1P38273 704 aa2.88□□□□□ -1.95
VMA9YCL005W-A ETP1P38748 585 aaKnown RBP2.88□□□□□ -1.95
VMA9YCL005W-A GIC1P38785 314 aa2.88□□□□□ -1.95
VMA9YCL005W-A CCC2P38995 1004 aa2.88□□□□□ -1.95
VMA9YCL005W-A SAH1P39954 449 aaKnown RBP2.88□□□□□ -1.95
VMA9YCL005W-A RPS0BP46654 252 aaKnown RBP2.88□□□□□ -1.95
VMA9YCL005W-A YJL049WP47048 450 aa2.88□□□□□ -1.95
VMA9YCL005W-A INP52P50942 1183 aa2.88□□□□□ -1.95
VMA9YCL005W-A MTC3P53077 123 aa2.88□□□□□ -1.95
VMA9YCL005W-A EAF1Q06337 982 aa2.88□□□□□ -1.95
VMA9YCL005W-A YOR059CQ08448 450 aaKnown RBP2.88□□□□□ -1.95
VMA9YCL005W-A YDL177CQ12257 170 aa2.88□□□□□ -1.95
VMA9YCL005W-A HBN1Q96VH4 193 aa2.88□□□□□ -1.95
VMA9YCL005W-A MSD1P15179 658 aaKnown RBP2.87□□□□□ -1.95
VMA9YCL005W-A HSP60P19882 572 aaKnown RBP2.87□□□□□ -1.95
VMA9YCL005W-A ADP1P25371 1049 aa2.87□□□□□ -1.95
VMA9YCL005W-A SRO9P25567 434 aaKnown RBP2.87□□□□□ -1.95
VMA9YCL005W-A PPH3P32345 308 aa2.87□□□□□ -1.95
VMA9YCL005W-A AAR2P32357 355 aaPredicted RBP2.87□□□□□ -1.95
VMA9YCL005W-A PUB1P32588 453 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95 RIP-Chip
VMA9YCL005W-A RIX1P38883 763 aaPredicted RBP2.87□□□□□ -1.95
VMA9YCL005W-A TCB2P48231 1178 aa2.87□□□□□ -1.95
VMA9YCL005W-A YRB30P53107 440 aaPredicted RBP2.87□□□□□ -1.95
VMA9YCL005W-A ERP6P53198 216 aa2.87□□□□□ -1.95
VMA9YCL005W-A UTP8P53276 713 aaKnown RBP2.87□□□□□ -1.95
VMA9YCL005W-A SFB2P53953 876 aa2.87□□□□□ -1.95
VMA9YCL005W-A NPL3Q01560 414 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95 RIP-Chip
VMA9YCL005W-A RPN4Q03465 531 aa2.87□□□□□ -1.95
VMA9YCL005W-A TAF8Q03750 510 aa2.87□□□□□ -1.95
VMA9YCL005W-A YPR071WQ12346 211 aa2.87□□□□□ -1.95
VMA9YCL005W-A OSH2Q12451 1283 aa2.87□□□□□ -1.95
VMA9YCL005W-A CAN1P04817 590 aa2.86□□□□□ -1.95
VMA9YCL005W-A SPS1P08458 490 aa2.86□□□□□ -1.95
VMA9YCL005W-A YRO2P38079 344 aa2.86□□□□□ -1.95
VMA9YCL005W-A GEM1P39722 662 aa2.86□□□□□ -1.95
VMA9YCL005W-A EAF7P53911 425 aaKnown RBP2.86□□□□□ -1.95
VMA9YCL005W-A BUL2Q03758 920 aaKnown RBP2.86□□□□□ -1.95
VMA9YCL005W-A SPO75Q07798 868 aa2.86□□□□□ -1.95
VMA9YCL005W-A MDM38Q08179 573 aa2.86□□□□□ -1.95
VMA9YCL005W-A RSB1Q08417 382 aa2.86□□□□□ -1.95
VMA9YCL005W-A SVS1Q12254 260 aa2.86□□□□□ -1.95
VMA9YCL005W-A RNA1P11745 407 aaKnown RBP2.85□□□□□ -1.95
VMA9YCL005W-A PRP9P19736 530 aaKnown RBP2.85□□□□□ -1.95
VMA9YCL005W-A ACE2P21192 770 aa2.85□□□□□ -1.95
VMA9YCL005W-A SRM1P21827 482 aa2.85□□□□□ -1.95
VMA9YCL005W-A POL12P38121 705 aaPredicted RBP2.85□□□□□ -1.95
VMA9YCL005W-A TOK1P40310 691 aa2.85□□□□□ -1.95
VMA9YCL005W-A NUP82P40368 713 aa2.85□□□□□ -1.95
VMA9YCL005W-A KRI1P42846 591 aaKnown RBP2.85□□□□□ -1.95
VMA9YCL005W-A RNH70P53331 553 aa2.85□□□□□ -1.95
VMA9YCL005W-A NSI1Q12457 570 aa2.85□□□□□ -1.95
VMA9YCL005W-A SEC3P33332 1336 aaKnown RBP2.85□□□□□ -1.95
VMA9YCL005W-A CMP2P14747 604 aa2.84□□□□□ -1.95
VMA9YCL005W-A GAL11P19659 1081 aa2.84□□□□□ -1.95
VMA9YCL005W-A APL1P27351 700 aa2.84□□□□□ -1.95
VMA9YCL005W-A MAC1P35192 417 aa2.84□□□□□ -1.95
VMA9YCL005W-A TSL1P38427 1098 aaKnown RBP2.84□□□□□ -1.95
VMA9YCL005W-A FUN12P39730 1002 aaKnown RBP2.84□□□□□ -1.95
VMA9YCL005W-A SRT1Q03175 343 aa2.84□□□□□ -1.95
VMA9YCL005W-A PLB2Q03674 706 aa2.84□□□□□ -1.95
VMA9YCL005W-A NBA1Q08229 501 aaKnown RBP2.84□□□□□ -1.95
VMA9YCL005W-A VTS1Q08831 523 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
VMA9YCL005W-A YOR131CQ12486 218 aa2.84□□□□□ -1.95
VMA9YCL005W-A GLT1Q12680 2145 aaKnown RBP2.84□□□□□ -1.96
VMA9YCL005W-A SGS1P35187 1447 aa2.84□□□□□ -1.96
VMA9YCL005W-A CYC1P00044 109 aaPredicted RBP2.83□□□□□ -1.96
VMA9YCL005W-A GAL10P04397 699 aa2.83□□□□□ -1.96
VMA9YCL005W-A TOM70P07213 617 aaKnown RBP2.83□□□□□ -1.96
VMA9YCL005W-A SRP101P32916 621 aa2.83□□□□□ -1.96
VMA9YCL005W-A SEG2P34250 1132 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 78.5 ms