RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 DDR1Q08345 913 aa19.76■□□□□ 0.75
SRRT-219ENST00000641476 BRCA1P38398 1863 aaKnown RBP19.75■□□□□ 0.75
SRRT-219ENST00000641476 PTCD1O75127 700 aaKnown RBP19.75■□□□□ 0.75
SRRT-219ENST00000641476 FKBP8Q14318 412 aa19.75■□□□□ 0.75
SRRT-219ENST00000641476 NFATC2IPQ8NCF5 419 aa19.75■□□□□ 0.75
SRRT-219ENST00000641476 PCNTO95613 3336 aa19.75■□□□□ 0.75
SRRT-219ENST00000641476 UBR2Q8IWV8 1755 aa19.75■□□□□ 0.75
SRRT-219ENST00000641476 CNGB1Q14028 1251 aaPredicted RBP19.74■□□□□ 0.75
SRRT-219ENST00000641476 USP42Q9H9J4 1324 aaKnown RBP19.74■□□□□ 0.75
SRRT-219ENST00000641476 RASSF7Q02833 373 aa19.73■□□□□ 0.75
SRRT-219ENST00000641476 ARFGEF1Q9Y6D6 1849 aa19.72■□□□□ 0.75
SRRT-219ENST00000641476 CRKLP46109 303 aaKnown RBP19.72■□□□□ 0.75
SRRT-219ENST00000641476 SLC52A2Q9HAB3 445 aa19.72■□□□□ 0.75
SRRT-219ENST00000641476 SIPA1L3O60292 1781 aaPredicted RBP19.71■□□□□ 0.75
SRRT-219ENST00000641476 RNMTO43148 476 aaKnown RBP19.71■□□□□ 0.75
SRRT-219ENST00000641476 HSPA1AP0DMV8 641 aaKnown RBP19.71■□□□□ 0.75
SRRT-219ENST00000641476 HSPA1BP0DMV9 641 aaKnown RBP19.71■□□□□ 0.75
SRRT-219ENST00000641476 MTHFSDQ2M296 383 aaKnown RBP19.71■□□□□ 0.75
SRRT-219ENST00000641476 TNRC6CQ9HCJ0 1690 aaKnown RBP19.71■□□□□ 0.75
SRRT-219ENST00000641476 LGR6Q9HBX8 967 aa19.7■□□□□ 0.74
SRRT-219ENST00000641476 POLRMTO00411 1230 aaKnown RBP19.69■□□□□ 0.74
SRRT-219ENST00000641476 U2SURPO15042 1029 aaKnown RBP19.68■□□□□ 0.74
SRRT-219ENST00000641476 ZC3H4Q9UPT8 1303 aaKnown RBP19.67■□□□□ 0.74
SRRT-219ENST00000641476 VEGFAP15692 232 aaPredicted RBP19.66■□□□□ 0.74
SRRT-219ENST00000641476 LMNB1P20700 586 aa19.66■□□□□ 0.74
SRRT-219ENST00000641476 SLC39A6Q13433 755 aa19.66■□□□□ 0.74
SRRT-219ENST00000641476 DNAJC10Q8IXB1 793 aa19.66■□□□□ 0.74
SRRT-219ENST00000641476 GLTPD2A6NH11 291 aa19.65■□□□□ 0.74
SRRT-219ENST00000641476 ZPR1O75312 459 aa19.65■□□□□ 0.74
SRRT-219ENST00000641476 TM4SF1P30408 202 aa19.64■□□□□ 0.73
SRRT-219ENST00000641476 USPL1Q5W0Q7 1092 aa19.64■□□□□ 0.73
SRRT-219ENST00000641476 INTS5Q6P9B9 1019 aaKnown RBP19.64■□□□□ 0.73
SRRT-219ENST00000641476 SOS1Q07889 1333 aaPredicted RBP19.63■□□□□ 0.73
SRRT-219ENST00000641476 GAS2L2Q8NHY3 880 aa19.63■□□□□ 0.73
SRRT-219ENST00000641476 COL15A1P39059 1388 aa19.62■□□□□ 0.73
SRRT-219ENST00000641476 CFAP53Q96M91 514 aa19.62■□□□□ 0.73
SRRT-219ENST00000641476 SCN7AQ01118 1682 aa19.62■□□□□ 0.73
SRRT-219ENST00000641476 CYP19A1P11511 503 aaPredicted RBP19.61■□□□□ 0.73
SRRT-219ENST00000641476 NFIXQ14938 502 aa19.6■□□□□ 0.73
SRRT-219ENST00000641476 RSPH6AQ9H0K4 717 aa19.6■□□□□ 0.73
SRRT-219ENST00000641476 ZBTB1Q9Y2K1 713 aa19.6■□□□□ 0.73
SRRT-219ENST00000641476 CEMIPQ8WUJ3 1361 aa19.59■□□□□ 0.73
SRRT-219ENST00000641476 SBF1O95248 1867 aa19.59■□□□□ 0.73
SRRT-219ENST00000641476 GNAT3A8MTJ3 354 aa19.59■□□□□ 0.73
SRRT-219ENST00000641476 PPP2R1AP30153 589 aa19.59■□□□□ 0.73
SRRT-219ENST00000641476 PRKAR2BP31323 418 aa19.59■□□□□ 0.73
SRRT-219ENST00000641476 VSIG10Q8N0Z9 540 aa19.59■□□□□ 0.73
SRRT-219ENST00000641476 TTLL6Q8N841 843 aa19.59■□□□□ 0.73
SRRT-219ENST00000641476 NRXN2Q9P2S2 1712 aa19.59■□□□□ 0.73
SRRT-219ENST00000641476 AFDNP55196 1824 aaKnown RBP19.58■□□□□ 0.73
SRRT-219ENST00000641476 C2CD5Q86YS7 1000 aa19.58■□□□□ 0.72
SRRT-219ENST00000641476 TTC5Q8N0Z6 440 aa19.58■□□□□ 0.72
SRRT-219ENST00000641476 NFKBIEO00221 500 aa19.57■□□□□ 0.72
SRRT-219ENST00000641476 TEFQ10587 303 aa19.57■□□□□ 0.72
SRRT-219ENST00000641476 IL17REQ8NFR9 667 aa19.57■□□□□ 0.72
SRRT-219ENST00000641476 POTECB2RU33 542 aa19.56■□□□□ 0.72
SRRT-219ENST00000641476 SERPINB2P05120 415 aa19.56■□□□□ 0.72
SRRT-219ENST00000641476 PHACTR3Q96KR7 559 aa19.56■□□□□ 0.72
SRRT-219ENST00000641476 MKRN1Q9UHC7 482 aaKnown RBP19.56■□□□□ 0.72
SRRT-219ENST00000641476 NARFQ9UHQ1 456 aa19.56■□□□□ 0.72
SRRT-219ENST00000641476 HEG1Q9ULI3 1381 aa19.56■□□□□ 0.72
SRRT-219ENST00000641476 H0YIN7 160 aa19.55■□□□□ 0.72
SRRT-219ENST00000641476 DPY19L2Q6NUT2 758 aa19.55■□□□□ 0.72
SRRT-219ENST00000641476 TIAM2Q8IVF5 1701 aa19.55■□□□□ 0.72
SRRT-219ENST00000641476 NUDCQ9Y266 331 aa19.55■□□□□ 0.72
SRRT-219ENST00000641476 CARMIL3Q8ND23 1372 aa19.55■□□□□ 0.72
SRRT-219ENST00000641476 DLEC1Q9Y238 1755 aa19.55■□□□□ 0.72
SRRT-219ENST00000641476 ZNF790Q6PG37 636 aa19.54■□□□□ 0.72
SRRT-219ENST00000641476 ZNF496Q96IT1 587 aaPredicted RBP19.54■□□□□ 0.72
SRRT-219ENST00000641476 BCORQ6W2J9 1755 aa19.53■□□□□ 0.72
SRRT-219ENST00000641476 U2AF1L5P0DN76 240 aaPredicted RBP19.53■□□□□ 0.72
SRRT-219ENST00000641476 U2AF1Q01081 240 aaKnown RBP eCLIP19.53■□□□□ 0.724e-24■■■□□ 19.2
SRRT-219ENST00000641476 BICDL1Q6ZP65 573 aa19.53■□□□□ 0.72
SRRT-219ENST00000641476 BCL2L12Q9HB09 334 aa19.53■□□□□ 0.72
SRRT-219ENST00000641476 ZNF219Q9P2Y4 722 aaPredicted RBP19.53■□□□□ 0.72
SRRT-219ENST00000641476 ERFEQ4G0M1 354 aa19.52■□□□□ 0.72
SRRT-219ENST00000641476 CREBZFQ9NS37 354 aa19.52■□□□□ 0.72
SRRT-219ENST00000641476 STARD3NLO95772 234 aa19.51■□□□□ 0.71
SRRT-219ENST00000641476 CANXP27824 592 aaKnown RBP19.51■□□□□ 0.71
SRRT-219ENST00000641476 CHADLQ6NUI6 762 aa19.51■□□□□ 0.71
SRRT-219ENST00000641476 POTEIP0CG38 1075 aa19.5■□□□□ 0.71
SRRT-219ENST00000641476 POTEJP0CG39 1038 aa19.5■□□□□ 0.71
SRRT-219ENST00000641476 ZNF622Q969S3 477 aaKnown RBP eCLIP19.5■□□□□ 0.712e-9■■□□□ 13.1
SRRT-219ENST00000641476 FMNL2Q96PY5 1086 aa19.5■□□□□ 0.71
SRRT-219ENST00000641476 DLG5Q8TDM6 1919 aa19.5■□□□□ 0.71
SRRT-219ENST00000641476 FOXN1O15353 648 aa19.49■□□□□ 0.71
SRRT-219ENST00000641476 C21orf2O43822 256 aa19.49■□□□□ 0.71
SRRT-219ENST00000641476 EIF5P55010 431 aaKnown RBP19.49■□□□□ 0.71
SRRT-219ENST00000641476 LAMB4A4D0S4 1761 aa19.49■□□□□ 0.71
SRRT-219ENST00000641476 BTBD11A6QL63 1104 aa19.48■□□□□ 0.71
SRRT-219ENST00000641476 ANKRD31Q8N7Z5 1873 aa19.48■□□□□ 0.71
SRRT-219ENST00000641476 KCNQ3O43525 872 aa19.47■□□□□ 0.71
SRRT-219ENST00000641476 MCM10Q7L590 875 aa19.47■□□□□ 0.71
SRRT-219ENST00000641476 CCDC24Q8N4L8 307 aa19.47■□□□□ 0.71
SRRT-219ENST00000641476 TEX13AQ9BXU3 409 aaPredicted RBP19.47■□□□□ 0.71
SRRT-219ENST00000641476 COL11A2P13942 1736 aaPredicted RBP19.47■□□□□ 0.71
SRRT-219ENST00000641476 KDM3BQ7LBC6 1761 aa19.47■□□□□ 0.71
SRRT-219ENST00000641476 RTF1Q92541 710 aaKnown RBP19.46■□□□□ 0.71
SRRT-219ENST00000641476 TAOK3Q9H2K8 898 aa19.46■□□□□ 0.71
SRRT-219ENST00000641476 CNTNAP1P78357 1384 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms