RNA–Protein interactions for RNA: ENST00000640939.1

GRAMD1B-217, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-217ENST00000640939 TAF7Q15545 349 aaPredicted RBP29.71■■■□□ 2.35
GRAMD1B-217ENST00000640939 ADAMTS8Q9UP79 889 aa29.71■■■□□ 2.35
GRAMD1B-217ENST00000640939 MMP10P09238 476 aa29.7■■■□□ 2.35
GRAMD1B-217ENST00000640939 CANXP27824 592 aaKnown RBP29.7■■■□□ 2.35
GRAMD1B-217ENST00000640939 RIPK4P57078 832 aa29.69■■■□□ 2.34
GRAMD1B-217ENST00000640939 NLGN1Q8N2Q7 840 aa29.69■■■□□ 2.34
GRAMD1B-217ENST00000640939 TEX13AQ9BXU3 409 aaPredicted RBP29.69■■■□□ 2.34
GRAMD1B-217ENST00000640939 TMPOP42166 694 aaKnown RBP29.68■■■□□ 2.34
GRAMD1B-217ENST00000640939 RRP7AQ9Y3A4 280 aaKnown RBP29.68■■■□□ 2.34
GRAMD1B-217ENST00000640939 USP42Q9H9J4 1324 aaKnown RBP29.68■■■□□ 2.34
GRAMD1B-217ENST00000640939 COL15A1P39059 1388 aa29.67■■■□□ 2.34
GRAMD1B-217ENST00000640939 PRAMEF22A3QJZ6 481 aa29.66■■■□□ 2.34
GRAMD1B-217ENST00000640939 RUNDC1Q96C34 613 aa29.66■■■□□ 2.34
GRAMD1B-217ENST00000640939 CD2APQ9Y5K6 639 aa29.65■■■□□ 2.34
GRAMD1B-217ENST00000640939 FKBP8Q14318 412 aa29.64■■■□□ 2.34
GRAMD1B-217ENST00000640939 NEUROD2Q15784 382 aa29.64■■■□□ 2.34
GRAMD1B-217ENST00000640939 KDM3BQ7LBC6 1761 aa29.63■■■□□ 2.33
GRAMD1B-217ENST00000640939 ZPR1O75312 459 aa29.63■■■□□ 2.33
GRAMD1B-217ENST00000640939 A1BGP04217 495 aa29.63■■■□□ 2.33
GRAMD1B-217ENST00000640939 CCDC184Q52MB2 194 aa29.63■■■□□ 2.33
GRAMD1B-217ENST00000640939 USPL1Q5W0Q7 1092 aa29.63■■■□□ 2.33
GRAMD1B-217ENST00000640939 USP16Q9Y5T5 823 aa29.63■■■□□ 2.33
GRAMD1B-217ENST00000640939 SNRPA1P09661 255 aaKnown RBP29.62■■■□□ 2.33
GRAMD1B-217ENST00000640939 PNISRQ8TF01 805 aaKnown RBP29.62■■■□□ 2.33
GRAMD1B-217ENST00000640939 ZNF330Q9Y3S2 320 aaPredicted RBP29.62■■■□□ 2.33
GRAMD1B-217ENST00000640939 EIF5P55010 431 aaKnown RBP29.61■■■□□ 2.33
GRAMD1B-217ENST00000640939 PELP1Q8IZL8 1130 aaKnown RBP29.61■■■□□ 2.33
GRAMD1B-217ENST00000640939 NARFQ9UHQ1 456 aa29.61■■■□□ 2.33
GRAMD1B-217ENST00000640939 GPR162Q16538 588 aa29.6■■■□□ 2.33
GRAMD1B-217ENST00000640939 PARP3Q9Y6F1 533 aa29.6■■■□□ 2.33
GRAMD1B-217ENST00000640939 ANP32CO43423 234 aa29.59■■■□□ 2.33
GRAMD1B-217ENST00000640939 PIP4K2AP48426 406 aaPredicted RBP29.59■■■□□ 2.33
GRAMD1B-217ENST00000640939 LMOD3Q0VAK6 560 aa29.59■■■□□ 2.33
GRAMD1B-217ENST00000640939 A0A087WZG4 1122 aa29.56■■■□□ 2.32
GRAMD1B-217ENST00000640939 IL6STP40189 918 aaPredicted RBP29.56■■■□□ 2.32
GRAMD1B-217ENST00000640939 DDR1Q08345 913 aa29.56■■■□□ 2.32
GRAMD1B-217ENST00000640939 BCL2L12Q9HB09 334 aa29.56■■■□□ 2.32
GRAMD1B-217ENST00000640939 EIF4A1P60842 406 aaKnown RBP29.55■■■□□ 2.32
GRAMD1B-217ENST00000640939 TSPYL4Q9UJ04 414 aa29.55■■■□□ 2.32
GRAMD1B-217ENST00000640939 TRIM35Q9UPQ4 493 aa29.55■■■□□ 2.32
GRAMD1B-217ENST00000640939 TBC1D2BQ9UPU7 963 aa29.54■■■□□ 2.32
GRAMD1B-217ENST00000640939 TM4SF1P30408 202 aa29.53■■■□□ 2.32
GRAMD1B-217ENST00000640939 C10orf71Q711Q0 1435 aa29.53■■■□□ 2.32
GRAMD1B-217ENST00000640939 KIF13BQ9NQT8 1826 aa29.52■■■□□ 2.32
GRAMD1B-217ENST00000640939 LAMB4A4D0S4 1761 aa29.52■■■□□ 2.32
GRAMD1B-217ENST00000640939 WWC3Q9ULE0 1092 aa29.52■■■□□ 2.32
GRAMD1B-217ENST00000640939 POLRMTO00411 1230 aaKnown RBP29.51■■■□□ 2.31
GRAMD1B-217ENST00000640939 GIGYF1O75420 1035 aaPredicted RBP29.51■■■□□ 2.31
GRAMD1B-217ENST00000640939 YBX3P16989 372 aaKnown RBP eCLIP29.51■■■□□ 2.31
GRAMD1B-217ENST00000640939 NFIXQ14938 502 aa29.51■■■□□ 2.31
GRAMD1B-217ENST00000640939 NPM2Q86SE8 214 aaKnown RBP29.51■■■□□ 2.31
GRAMD1B-217ENST00000640939 UTRNP46939 3433 aa29.51■■■□□ 2.31
GRAMD1B-217ENST00000640939 NBPF26B4DH59 902 aa29.5■■■□□ 2.31
GRAMD1B-217ENST00000640939 APAF1O14727 1248 aa29.5■■■□□ 2.31
GRAMD1B-217ENST00000640939 NBPF10Q6P3W6 841 aaKnown RBP29.5■■■□□ 2.31
GRAMD1B-217ENST00000640939 NBPF15Q8N660 670 aa29.5■■■□□ 2.31
GRAMD1B-217ENST00000640939 SCN7AQ01118 1682 aa29.5■■■□□ 2.31
GRAMD1B-217ENST00000640939 MRS2Q9HD23 443 aa29.49■■■□□ 2.31
GRAMD1B-217ENST00000640939 GOLGB1Q14789 3259 aaKnown RBP29.48■■■□□ 2.31
GRAMD1B-217ENST00000640939 BICDL1Q6ZP65 573 aa29.48■■■□□ 2.31
GRAMD1B-217ENST00000640939 N4BP2Q86UW6 1770 aaPredicted RBP29.48■■■□□ 2.31
GRAMD1B-217ENST00000640939 KIAA1551Q9HCM1 1747 aa29.48■■■□□ 2.31
GRAMD1B-217ENST00000640939 YY1P25490 414 aa29.47■■■□□ 2.31
GRAMD1B-217ENST00000640939 DZIP3Q86Y13 1208 aaKnown RBP29.47■■■□□ 2.31
GRAMD1B-217ENST00000640939 LAS1LQ9Y4W2 734 aaKnown RBP29.47■■■□□ 2.31
GRAMD1B-217ENST00000640939 PXDNLA1KZ92 1463 aa29.47■■■□□ 2.31
GRAMD1B-217ENST00000640939 BABAM1Q9NWV8 329 aa29.46■■■□□ 2.31
GRAMD1B-217ENST00000640939 AFDNP55196 1824 aaKnown RBP29.45■■■□□ 2.31
GRAMD1B-217ENST00000640939 CAMTA2O94983 1202 aa29.45■■■□□ 2.31
GRAMD1B-217ENST00000640939 TBC1D9BQ66K14 1250 aa29.45■■■□□ 2.31
GRAMD1B-217ENST00000640939 A0A0G2JLW4 131 aa29.44■■■□□ 2.3
GRAMD1B-217ENST00000640939 TGFB2P61812 414 aa29.44■■■□□ 2.3
GRAMD1B-217ENST00000640939 BCORQ6W2J9 1755 aa29.44■■■□□ 2.3
GRAMD1B-217ENST00000640939 SENP3-EIF4A1A0A087X0R7 540 aa29.42■■■□□ 2.3
GRAMD1B-217ENST00000640939 CHL1O00533 1208 aa29.42■■■□□ 2.3
GRAMD1B-217ENST00000640939 SERPINB2P05120 415 aa29.42■■■□□ 2.3
GRAMD1B-217ENST00000640939 DPEP1P16444 411 aa29.42■■■□□ 2.3
GRAMD1B-217ENST00000640939 GRIN3BO60391 1043 aa29.41■■■□□ 2.3
GRAMD1B-217ENST00000640939 NGEFQ8N5V2 710 aa29.41■■■□□ 2.3
GRAMD1B-217ENST00000640939 CHD4Q14839 1912 aa29.41■■■□□ 2.3
GRAMD1B-217ENST00000640939 NRXN2Q9P2S2 1712 aa29.4■■■□□ 2.3
GRAMD1B-217ENST00000640939 MYL6BP14649 208 aa29.38■■■□□ 2.29
GRAMD1B-217ENST00000640939 EIF2S2P20042 333 aaKnown RBP29.38■■■□□ 2.29
GRAMD1B-217ENST00000640939 KRT24Q2M2I5 525 aa29.38■■■□□ 2.29
GRAMD1B-217ENST00000640939 KCNA3P22001 575 aa29.35■■■□□ 2.29
GRAMD1B-217ENST00000640939 CHRNA5P30532 468 aa29.35■■■□□ 2.29
GRAMD1B-217ENST00000640939 CFAP44Q96MT7 982 aa29.35■■■□□ 2.29
GRAMD1B-217ENST00000640939 SETDB2Q96T68 719 aa29.35■■■□□ 2.29
GRAMD1B-217ENST00000640939 CARMIL3Q8ND23 1372 aa29.35■■■□□ 2.29
GRAMD1B-217ENST00000640939 NECTIN2Q92692 538 aa29.34■■■□□ 2.29
GRAMD1B-217ENST00000640939 BCS1LQ9Y276 419 aa29.34■■■□□ 2.29
GRAMD1B-217ENST00000640939 ZNF652Q9Y2D9 606 aa29.34■■■□□ 2.29
GRAMD1B-217ENST00000640939 BRCA1P38398 1863 aaKnown RBP29.34■■■□□ 2.29
GRAMD1B-217ENST00000640939 CLEC4GQ6UXB4 293 aa29.33■■■□□ 2.29
GRAMD1B-217ENST00000640939 TTLL7Q6ZT98 887 aa29.33■■■□□ 2.29
GRAMD1B-217ENST00000640939 CCDC24Q8N4L8 307 aa29.33■■■□□ 2.29
GRAMD1B-217ENST00000640939 ERBB4Q15303 1308 aa29.32■■■□□ 2.28
GRAMD1B-217ENST00000640939 HLFQ16534 295 aa29.32■■■□□ 2.28
GRAMD1B-217ENST00000640939 MBIPQ9NS73 344 aa29.32■■■□□ 2.28
GRAMD1B-217ENST00000640939 ZNF853P0CG23 659 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms