RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 BMP2KLQ5H9B9 411 aa15.24■□□□□ 0.03
PAX6-261ENST00000639943 HYPKQ9NX55 129 aa15.24■□□□□ 0.03
PAX6-261ENST00000639943 ROBO1Q9Y6N7 1651 aa15.24■□□□□ 0.03
PAX6-261ENST00000639943 SLC39A6Q13433 755 aa15.24■□□□□ 0.03
PAX6-261ENST00000639943 TMEM132AQ24JP5 1023 aa15.24■□□□□ 0.03
PAX6-261ENST00000639943 PI4KAP2A4QPH2 592 aa15.23■□□□□ 0.03
PAX6-261ENST00000639943 IL2RBP14784 551 aa15.23■□□□□ 0.03
PAX6-261ENST00000639943 CABP4P57796 275 aa15.23■□□□□ 0.03
PAX6-261ENST00000639943 PI4KAP1Q8N8J0 262 aa15.23■□□□□ 0.03
PAX6-261ENST00000639943 USP44Q9H0E7 712 aa15.23■□□□□ 0.03
PAX6-261ENST00000639943 UBTFL1P0CB47 393 aaPredicted RBP15.23■□□□□ 0.03
PAX6-261ENST00000639943 TTC5Q8N0Z6 440 aa15.23■□□□□ 0.03
PAX6-261ENST00000639943 PKNOX2Q96KN3 472 aa15.23■□□□□ 0.03
PAX6-261ENST00000639943 DDX21Q9NR30 783 aaKnown RBP eCLIP15.23■□□□□ 0.03
PAX6-261ENST00000639943 AHDC1Q5TGY3 1603 aaPredicted RBP15.23■□□□□ 0.03
PAX6-261ENST00000639943 ANXA1P04083 346 aa15.22■□□□□ 0.03
PAX6-261ENST00000639943 ATP8B2P98198 1209 aa15.22■□□□□ 0.03
PAX6-261ENST00000639943 STRN4Q9NRL3 753 aa15.22■□□□□ 0.03
PAX6-261ENST00000639943 PRAMEF22A3QJZ6 481 aa15.22■□□□□ 0.03
PAX6-261ENST00000639943 BEND3Q5T5X7 828 aa15.22■□□□□ 0.03
PAX6-261ENST00000639943 C5P01031 1676 aa15.21■□□□□ 0.03
PAX6-261ENST00000639943 ADCY9O60503 1353 aa15.21■□□□□ 0.03
PAX6-261ENST00000639943 LARP1Q6PKG0 1096 aaKnown RBP15.21■□□□□ 0.03
PAX6-261ENST00000639943 PAXIP1Q6ZW49 1069 aaPredicted RBP15.21■□□□□ 0.03
PAX6-261ENST00000639943 PROSER3Q2NL68 480 aa15.21■□□□□ 0.02
PAX6-261ENST00000639943 KSR2Q6VAB6 950 aa15.21■□□□□ 0.02
PAX6-261ENST00000639943 FMNL2Q96PY5 1086 aa15.21■□□□□ 0.02
PAX6-261ENST00000639943 ANO8Q9HCE9 1232 aaPredicted RBP15.21■□□□□ 0.02
PAX6-261ENST00000639943 LRRFIP2Q9Y608 721 aaKnown RBP15.21■□□□□ 0.02
PAX6-261ENST00000639943 LTBP4Q8N2S1 1624 aa15.21■□□□□ 0.02
PAX6-261ENST00000639943 DDX58O95786 925 aaKnown RBP15.2■□□□□ 0.02
PAX6-261ENST00000639943 SNRPA1P09661 255 aaKnown RBP15.2■□□□□ 0.02
PAX6-261ENST00000639943 PLEKHM2Q8IWE5 1019 aa15.2■□□□□ 0.02
PAX6-261ENST00000639943 ERVV-2B6SEH9 535 aa15.2■□□□□ 0.02
PAX6-261ENST00000639943 NKX1-1Q15270 411 aaPredicted RBP15.2■□□□□ 0.02
PAX6-261ENST00000639943 ZNF496Q96IT1 587 aaPredicted RBP15.2■□□□□ 0.02
PAX6-261ENST00000639943 COL22A1Q8NFW1 1626 aaPredicted RBP15.19■□□□□ 0.02
PAX6-261ENST00000639943 COL14A1Q05707 1796 aaKnown RBP15.19■□□□□ 0.02
PAX6-261ENST00000639943 TBC1D32Q96NH3 1257 aa15.19■□□□□ 0.02
PAX6-261ENST00000639943 ALDH1L1O75891 902 aa15.19■□□□□ 0.02
PAX6-261ENST00000639943 PDIA6Q15084 440 aa15.19■□□□□ 0.02
PAX6-261ENST00000639943 MAP3K2Q9Y2U5 619 aa15.19■□□□□ 0.02
PAX6-261ENST00000639943 SHANK3Q9BYB0 1731 aa15.18■□□□□ 0.02
PAX6-261ENST00000639943 PNMA6EA0A0J9YXQ4 647 aa15.17■□□□□ 0.02
PAX6-261ENST00000639943 BTG4Q9NY30 223 aa15.17■□□□□ 0.02
PAX6-261ENST00000639943 HDAC5Q9UQL6 1122 aa15.17■□□□□ 0.02
PAX6-261ENST00000639943 APBB1O00213 710 aa15.16■□□□□ 0.02
PAX6-261ENST00000639943 SMARCA5O60264 1052 aaPredicted RBP15.16■□□□□ 0.02
PAX6-261ENST00000639943 SSH3Q8TE77 659 aa15.16■□□□□ 0.02
PAX6-261ENST00000639943 MFAP1P55081 439 aaKnown RBP15.16■□□□□ 0.02
PAX6-261ENST00000639943 TTC22Q5TAA0 569 aa15.16■□□□□ 0.02
PAX6-261ENST00000639943 C16orf71Q8IYS4 520 aaPredicted RBP15.16■□□□□ 0.02
PAX6-261ENST00000639943 LAMB4A4D0S4 1761 aa15.16■□□□□ 0.02
PAX6-261ENST00000639943 IFNLR1Q8IU57 520 aaPredicted RBP15.15■□□□□ 0.02
PAX6-261ENST00000639943 LINS1Q8NG48 757 aa15.15■□□□□ 0.02
PAX6-261ENST00000639943 DDX54Q8TDD1 881 aaKnown RBP15.15■□□□□ 0.02
PAX6-261ENST00000639943 LRRCC1Q9C099 1032 aa15.15■□□□□ 0.02
PAX6-261ENST00000639943 EXOC6BQ9Y2D4 811 aa15.15■□□□□ 0.02
PAX6-261ENST00000639943 IBTKQ9P2D0 1353 aaPredicted RBP15.15■□□□□ 0.02
PAX6-261ENST00000639943 NBPF7P0C2Y1 421 aaPredicted RBP15.15■□□□□ 0.02
PAX6-261ENST00000639943 USP16Q9Y5T5 823 aa15.15■□□□□ 0.02
PAX6-261ENST00000639943 AIMP1Q12904 312 aaKnown RBP15.14■□□□□ 0.01
PAX6-261ENST00000639943 C22orf23Q9BZE7 217 aa15.14■□□□□ 0.01
PAX6-261ENST00000639943 UBR2Q8IWV8 1755 aa15.14■□□□□ 0.01
PAX6-261ENST00000639943 MYL6BP14649 208 aa15.14■□□□□ 0.01
PAX6-261ENST00000639943 POLA2Q14181 598 aa15.14■□□□□ 0.01
PAX6-261ENST00000639943 PPP1R42Q7Z4L9 355 aa15.14■□□□□ 0.01
PAX6-261ENST00000639943 RIC3Q7Z5B4 369 aa15.14■□□□□ 0.01
PAX6-261ENST00000639943 C9orf78Q9NZ63 289 aaPredicted RBP15.14■□□□□ 0.01
PAX6-261ENST00000639943 CDC45O75419 566 aa15.13■□□□□ 0.01
PAX6-261ENST00000639943 GSPT1P15170 499 aaKnown RBP15.13■□□□□ 0.01
PAX6-261ENST00000639943 COL16A1Q07092 1604 aaPredicted RBP15.13■□□□□ 0.01
PAX6-261ENST00000639943 PAPPAQ13219 1627 aa15.13■□□□□ 0.01
PAX6-261ENST00000639943 GLI3P10071 1580 aa15.13■□□□□ 0.01
PAX6-261ENST00000639943 RAB11FIP3O75154 756 aa15.13■□□□□ 0.01
PAX6-261ENST00000639943 BECN1Q14457 450 aa15.13■□□□□ 0.01
PAX6-261ENST00000639943 OTUD7AQ8TE49 926 aaPredicted RBP15.13■□□□□ 0.01
PAX6-261ENST00000639943 XAGE3Q8WTP9 111 aa15.13■□□□□ 0.01
PAX6-261ENST00000639943 OSBPL3Q9H4L5 887 aa15.13■□□□□ 0.01
PAX6-261ENST00000639943 USP35Q9P2H5 1018 aa15.13■□□□□ 0.01
PAX6-261ENST00000639943 PHLPP1O60346 1717 aa15.13■□□□□ 0.01
PAX6-261ENST00000639943 ERBB4Q15303 1308 aa15.12■□□□□ 0.01
PAX6-261ENST00000639943 NEXNQ0ZGT2 675 aa15.12■□□□□ 0.01
PAX6-261ENST00000639943 TBC1D9Q6ZT07 1266 aa15.12■□□□□ 0.01
PAX6-261ENST00000639943 COPS6Q7L5N1 327 aa15.12■□□□□ 0.01
PAX6-261ENST00000639943 SRGAP3O43295 1099 aa15.11■□□□□ 0.01
PAX6-261ENST00000639943 LRP10Q7Z4F1 713 aa15.11■□□□□ 0.01
PAX6-261ENST00000639943 UTYO14607 1347 aa15.11■□□□□ 0.01
PAX6-261ENST00000639943 MTX1Q13505 466 aa15.11■□□□□ 0.01
PAX6-261ENST00000639943 CWF19L2Q2TBE0 894 aaKnown RBP15.11■□□□□ 0.01
PAX6-261ENST00000639943 GRM8O00222 908 aa15.1■□□□□ 0.01
PAX6-261ENST00000639943 PDE1AP54750 535 aa15.1■□□□□ 0.01
PAX6-261ENST00000639943 HSP90AB4PQ58FF6 505 aa15.1■□□□□ 0.01
PAX6-261ENST00000639943 ANKRD13DQ6ZTN6 518 aa15.1■□□□□ 0.01
PAX6-261ENST00000639943 METTL22Q9BUU2 404 aaPredicted RBP15.1■□□□□ 0.01
PAX6-261ENST00000639943 PLCH1Q4KWH8 1693 aa15.1■□□□□ 0.01
PAX6-261ENST00000639943 DISP2A7MBM2 1401 aa15.1■□□□□ 0.01
PAX6-261ENST00000639943 KCPQ6ZWJ8 1503 aa15.1■□□□□ 0.01
PAX6-261ENST00000639943 TOGARAM1Q9Y4F4 1720 aa15.09■□□□□ 0.01
PAX6-261ENST00000639943 SURF6O75683 361 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms