RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 DDNO94850 711 aaPredicted RBP15.43■□□□□ 0.06
PTP4A1-207ENST00000639568 C2CD5Q86YS7 1000 aa15.43■□□□□ 0.06
PTP4A1-207ENST00000639568 WDR33Q9C0J8 1336 aaKnown RBP15.43■□□□□ 0.06
PTP4A1-207ENST00000639568 RASSF10A6NK89 507 aa15.41■□□□□ 0.06
PTP4A1-207ENST00000639568 CABP4P57796 275 aa15.41■□□□□ 0.06
PTP4A1-207ENST00000639568 EAPPQ56P03 285 aaPredicted RBP15.41■□□□□ 0.06
PTP4A1-207ENST00000639568 USPL1Q5W0Q7 1092 aa15.41■□□□□ 0.06
PTP4A1-207ENST00000639568 ABT1Q9ULW3 272 aaKnown RBP15.41■□□□□ 0.06
PTP4A1-207ENST00000639568 CLEC11AQ9Y240 323 aa15.41■□□□□ 0.06
PTP4A1-207ENST00000639568 HSP90AB1P08238 724 aaKnown RBP15.4■□□□□ 0.06
PTP4A1-207ENST00000639568 ZNF219Q9P2Y4 722 aaPredicted RBP15.4■□□□□ 0.06
PTP4A1-207ENST00000639568 TONSLQ96HA7 1378 aa15.39■□□□□ 0.05
PTP4A1-207ENST00000639568 C21orf2O43822 256 aa15.39■□□□□ 0.05
PTP4A1-207ENST00000639568 ITGBL1O95965 494 aaPredicted RBP15.39■□□□□ 0.05
PTP4A1-207ENST00000639568 NEUROD1Q13562 356 aa15.39■□□□□ 0.05
PTP4A1-207ENST00000639568 TAF1DQ9H5J8 278 aaPredicted RBP15.39■□□□□ 0.05
PTP4A1-207ENST00000639568 SERPINB2P05120 415 aa15.38■□□□□ 0.05
PTP4A1-207ENST00000639568 NFIXQ14938 502 aa15.38■□□□□ 0.05
PTP4A1-207ENST00000639568 PAXIP1Q6ZW49 1069 aaPredicted RBP15.38■□□□□ 0.05
PTP4A1-207ENST00000639568 ZNF622Q969S3 477 aaKnown RBP eCLIP15.38■□□□□ 0.05
PTP4A1-207ENST00000639568 EYA1Q99502 592 aa15.38■□□□□ 0.05
PTP4A1-207ENST00000639568 TAOK3Q9H2K8 898 aa15.38■□□□□ 0.05
PTP4A1-207ENST00000639568 EMILIN1Q9Y6C2 1016 aa15.38■□□□□ 0.05
PTP4A1-207ENST00000639568 TIAM2Q8IVF5 1701 aa15.37■□□□□ 0.05
PTP4A1-207ENST00000639568 SLC24A1O60721 1099 aa15.37■□□□□ 0.05
PTP4A1-207ENST00000639568 GRM1Q13255 1194 aa15.36■□□□□ 0.05
PTP4A1-207ENST00000639568 ECE1P42892 770 aa15.35■□□□□ 0.05
PTP4A1-207ENST00000639568 INTS5Q6P9B9 1019 aaKnown RBP15.35■□□□□ 0.05
PTP4A1-207ENST00000639568 CNTROBQ8N137 903 aa15.35■□□□□ 0.05
PTP4A1-207ENST00000639568 L3MBTL3Q96JM7 780 aaPredicted RBP15.35■□□□□ 0.05
PTP4A1-207ENST00000639568 SIN3AQ96ST3 1273 aa15.35■□□□□ 0.05
PTP4A1-207ENST00000639568 NCAPD2Q15021 1401 aa15.34■□□□□ 0.05
PTP4A1-207ENST00000639568 PNMA8AQ86V59 439 aaPredicted RBP15.34■□□□□ 0.05
PTP4A1-207ENST00000639568 GPR101Q96P66 508 aaPredicted RBP15.34■□□□□ 0.05
PTP4A1-207ENST00000639568 MCOLN1Q9GZU1 580 aa15.34■□□□□ 0.05
PTP4A1-207ENST00000639568 HACL1Q9UJ83 578 aa15.34■□□□□ 0.05
PTP4A1-207ENST00000639568 PDZRN3Q9UPQ7 1066 aa15.34■□□□□ 0.05
PTP4A1-207ENST00000639568 LTBP3Q9NS15 1303 aa15.34■□□□□ 0.05
PTP4A1-207ENST00000639568 TNRC18O15417 2968 aaPredicted RBP15.33■□□□□ 0.05
PTP4A1-207ENST00000639568 ZNF831Q5JPB2 1677 aa15.33■□□□□ 0.04
PTP4A1-207ENST00000639568 PDE6BP35913 854 aa15.33■□□□□ 0.04
PTP4A1-207ENST00000639568 CAPNS2Q96L46 248 aa15.33■□□□□ 0.04
PTP4A1-207ENST00000639568 NARFQ9UHQ1 456 aa15.33■□□□□ 0.04
PTP4A1-207ENST00000639568 ST20-MTHFSA0A0A6YYL1 179 aa15.32■□□□□ 0.04
PTP4A1-207ENST00000639568 EPHX2P34913 555 aa15.32■□□□□ 0.04
PTP4A1-207ENST00000639568 MTHFSP49914 203 aa15.32■□□□□ 0.04
PTP4A1-207ENST00000639568 PLEKHO1Q53GL0 409 aaPredicted RBP15.32■□□□□ 0.04
PTP4A1-207ENST00000639568 MAP1SQ66K74 1059 aaPredicted RBP15.32■□□□□ 0.04
PTP4A1-207ENST00000639568 PIAS4Q8N2W9 510 aaPredicted RBP15.32■□□□□ 0.04
PTP4A1-207ENST00000639568 TSKSQ9UJT2 592 aa15.32■□□□□ 0.04
PTP4A1-207ENST00000639568 WASHC2AQ641Q2 1341 aa15.32■□□□□ 0.04
PTP4A1-207ENST00000639568 SOGA3Q5TF21 947 aa15.31■□□□□ 0.04
PTP4A1-207ENST00000639568 BICDL1Q6ZP65 573 aa15.31■□□□□ 0.04
PTP4A1-207ENST00000639568 NFATC2IPQ8NCF5 419 aa15.31■□□□□ 0.04
PTP4A1-207ENST00000639568 COL5A3P25940 1745 aaPredicted RBP15.31■□□□□ 0.04
PTP4A1-207ENST00000639568 CA12O43570 354 aa15.3■□□□□ 0.04
PTP4A1-207ENST00000639568 SOS1Q07889 1333 aaPredicted RBP15.3■□□□□ 0.04
PTP4A1-207ENST00000639568 DGKZQ13574 1117 aa15.3■□□□□ 0.04
PTP4A1-207ENST00000639568 ZNF530Q6P9A1 599 aaPredicted RBP15.3■□□□□ 0.04
PTP4A1-207ENST00000639568 BRIP1Q9BX63 1249 aa15.3■□□□□ 0.04
PTP4A1-207ENST00000639568 C1orf141Q5JVX7 400 aa15.29■□□□□ 0.04
PTP4A1-207ENST00000639568 CYP4F22Q6NT55 531 aa15.29■□□□□ 0.04
PTP4A1-207ENST00000639568 TESK2Q96S53 571 aa15.29■□□□□ 0.04
PTP4A1-207ENST00000639568 DDX21Q9NR30 783 aaKnown RBP eCLIP15.29■□□□□ 0.04
PTP4A1-207ENST00000639568 CARMIL3Q8ND23 1372 aa15.28■□□□□ 0.04
PTP4A1-207ENST00000639568 NPHP1O15259 732 aa15.28■□□□□ 0.04
PTP4A1-207ENST00000639568 AMOTQ4VCS5 1084 aa15.28■□□□□ 0.04
PTP4A1-207ENST00000639568 PRPF38BQ5VTL8 546 aaKnown RBP15.28■□□□□ 0.04
PTP4A1-207ENST00000639568 DNAJC10Q8IXB1 793 aa15.28■□□□□ 0.04
PTP4A1-207ENST00000639568 CNKSR1Q969H4 720 aa15.28■□□□□ 0.04
PTP4A1-207ENST00000639568 VIRMAQ69YN4 1812 aaKnown RBP15.28■□□□□ 0.04
PTP4A1-207ENST00000639568 MYH14Q7Z406 1995 aaKnown RBP15.27■□□□□ 0.04
PTP4A1-207ENST00000639568 MAP2K2P36507 400 aa15.27■□□□□ 0.04
PTP4A1-207ENST00000639568 COL15A1P39059 1388 aa15.26■□□□□ 0.03
PTP4A1-207ENST00000639568 PRPF40BQ6NWY9 871 aaKnown RBP15.26■□□□□ 0.03
PTP4A1-207ENST00000639568 BCL2L12Q9HB09 334 aa15.26■□□□□ 0.03
PTP4A1-207ENST00000639568 RNF123Q5XPI4 1314 aa15.25■□□□□ 0.03
PTP4A1-207ENST00000639568 CYP19A1P11511 503 aaPredicted RBP15.25■□□□□ 0.03
PTP4A1-207ENST00000639568 EIF4A2Q14240 407 aaKnown RBP15.25■□□□□ 0.03
PTP4A1-207ENST00000639568 PDE4DIPQ5VU43 2346 aa15.25■□□□□ 0.03
PTP4A1-207ENST00000639568 ZNF541Q9H0D2 1346 aa15.24■□□□□ 0.03
PTP4A1-207ENST00000639568 STYK1Q6J9G0 422 aa15.24■□□□□ 0.03
PTP4A1-207ENST00000639568 CCDC24Q8N4L8 307 aa15.24■□□□□ 0.03
PTP4A1-207ENST00000639568 CCDC88AQ3V6T2 1871 aa15.24■□□□□ 0.03
PTP4A1-207ENST00000639568 AOC2O75106 756 aa15.23■□□□□ 0.03
PTP4A1-207ENST00000639568 KCNA4P22459 653 aa15.23■□□□□ 0.03
PTP4A1-207ENST00000639568 CCDC93Q567U6 631 aa15.23■□□□□ 0.03
PTP4A1-207ENST00000639568 ZBTB1Q9Y2K1 713 aa15.23■□□□□ 0.03
PTP4A1-207ENST00000639568 DLEC1Q9Y238 1755 aa15.22■□□□□ 0.03
PTP4A1-207ENST00000639568 CANXP27824 592 aaKnown RBP15.22■□□□□ 0.03
PTP4A1-207ENST00000639568 SOX10P56693 466 aa15.22■□□□□ 0.03
PTP4A1-207ENST00000639568 PRR5LQ6MZQ0 368 aa15.22■□□□□ 0.03
PTP4A1-207ENST00000639568 ZNF277Q9NRM2 450 aaPredicted RBP15.22■□□□□ 0.03
PTP4A1-207ENST00000639568 POLKQ9UBT6 870 aa15.22■□□□□ 0.03
PTP4A1-207ENST00000639568 SCN4AP35499 1836 aa15.22■□□□□ 0.03
PTP4A1-207ENST00000639568 A0A087WZG4 1122 aa15.21■□□□□ 0.03
PTP4A1-207ENST00000639568 LMOD1P29536 600 aaPredicted RBP15.21■□□□□ 0.03
PTP4A1-207ENST00000639568 TBC1D9BQ66K14 1250 aa15.21■□□□□ 0.03
PTP4A1-207ENST00000639568 GPC2Q8N158 579 aa15.21■□□□□ 0.03
PTP4A1-207ENST00000639568 MASTLQ96GX5 879 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms