RNA–Protein interactions for RNA: ENST00000639483.1

KCNMA1-260, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 4,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-260ENST00000639483 TMEM94Q12767 1356 aa19.59■□□□□ 0.73
KCNMA1-260ENST00000639483 ANKRD13DQ6ZTN6 518 aa19.59■□□□□ 0.73
KCNMA1-260ENST00000639483 TOMM22Q9NS69 142 aa19.59■□□□□ 0.73
KCNMA1-260ENST00000639483 NEURL4Q96JN8 1562 aa19.59■□□□□ 0.73
KCNMA1-260ENST00000639483 TMOD3Q9NYL9 352 aa19.59■□□□□ 0.73
KCNMA1-260ENST00000639483 NPHP4O75161 1426 aaPredicted RBP19.58■□□□□ 0.73
KCNMA1-260ENST00000639483 NUCB2P80303 420 aa19.58■□□□□ 0.73
KCNMA1-260ENST00000639483 SNRPA1P09661 255 aaKnown RBP19.58■□□□□ 0.72
KCNMA1-260ENST00000639483 KSR2Q6VAB6 950 aa19.58■□□□□ 0.72
KCNMA1-260ENST00000639483 WASHC4Q2M389 1173 aa19.57■□□□□ 0.72
KCNMA1-260ENST00000639483 ARHGEF25Q86VW2 580 aa19.57■□□□□ 0.72
KCNMA1-260ENST00000639483 ZCRB1Q8TBF4 217 aaKnown RBP19.57■□□□□ 0.72
KCNMA1-260ENST00000639483 KIAA0232Q92628 1395 aa19.57■□□□□ 0.72
KCNMA1-260ENST00000639483 SPATA31D1Q6ZQQ2 1576 aa19.57■□□□□ 0.72
KCNMA1-260ENST00000639483 KIF6Q6ZMV9 814 aa19.57■□□□□ 0.72
KCNMA1-260ENST00000639483 KLHDC4Q8TBB5 520 aa19.57■□□□□ 0.72
KCNMA1-260ENST00000639483 RAB11FIP3O75154 756 aa19.56■□□□□ 0.72
KCNMA1-260ENST00000639483 GPTP24298 496 aa19.56■□□□□ 0.72
KCNMA1-260ENST00000639483 SMC3Q9UQE7 1217 aa19.56■□□□□ 0.72
KCNMA1-260ENST00000639483 RTL1A6NKG5 1358 aa19.56■□□□□ 0.72
KCNMA1-260ENST00000639483 ZNF790Q6PG37 636 aa19.56■□□□□ 0.72
KCNMA1-260ENST00000639483 AXIN2Q9Y2T1 843 aa19.56■□□□□ 0.72
KCNMA1-260ENST00000639483 MED14O60244 1454 aa19.56■□□□□ 0.72
KCNMA1-260ENST00000639483 APPP05067 770 aa19.56■□□□□ 0.72
KCNMA1-260ENST00000639483 SSFA2P28290 1259 aa19.56■□□□□ 0.72
KCNMA1-260ENST00000639483 IL27Q8NEV9 243 aa19.56■□□□□ 0.72
KCNMA1-260ENST00000639483 GRM8O00222 908 aa19.55■□□□□ 0.72
KCNMA1-260ENST00000639483 PRPF40AO75400 957 aaKnown RBP19.55■□□□□ 0.72
KCNMA1-260ENST00000639483 GLRX3O76003 335 aaKnown RBP19.55■□□□□ 0.72
KCNMA1-260ENST00000639483 USP44Q9H0E7 712 aa19.55■□□□□ 0.72
KCNMA1-260ENST00000639483 GSPT1P15170 499 aaKnown RBP19.55■□□□□ 0.72
KCNMA1-260ENST00000639483 PROSER3Q2NL68 480 aa19.55■□□□□ 0.72
KCNMA1-260ENST00000639483 IQSEC2Q5JU85 1478 aa19.55■□□□□ 0.72
KCNMA1-260ENST00000639483 ZNF496Q96IT1 587 aaPredicted RBP19.55■□□□□ 0.72
KCNMA1-260ENST00000639483 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.54■□□□□ 0.72
KCNMA1-260ENST00000639483 RNF20Q5VTR2 975 aa19.54■□□□□ 0.72
KCNMA1-260ENST00000639483 FKBP4Q02790 459 aaKnown RBP eCLIP19.53■□□□□ 0.72
KCNMA1-260ENST00000639483 STK3Q13188 491 aa19.53■□□□□ 0.72
KCNMA1-260ENST00000639483 JAKMIP1Q96N16 626 aaKnown RBP19.53■□□□□ 0.72
KCNMA1-260ENST00000639483 DLC1Q96QB1 1528 aa19.53■□□□□ 0.72
KCNMA1-260ENST00000639483 CAVIN1Q6NZI2 390 aaKnown RBP19.53■□□□□ 0.72
KCNMA1-260ENST00000639483 PTMSP20962 102 aa19.53■□□□□ 0.72
KCNMA1-260ENST00000639483 PRPF40BQ6NWY9 871 aaKnown RBP19.53■□□□□ 0.72
KCNMA1-260ENST00000639483 TNPO1Q92973 898 aaKnown RBP19.52■□□□□ 0.72
KCNMA1-260ENST00000639483 CCDC57Q2TAC2 916 aa19.52■□□□□ 0.72
KCNMA1-260ENST00000639483 ECHDC1Q9NTX5 307 aa19.52■□□□□ 0.71
KCNMA1-260ENST00000639483 LINS1Q8NG48 757 aa19.51■□□□□ 0.71
KCNMA1-260ENST00000639483 USP16Q9Y5T5 823 aa19.51■□□□□ 0.71
KCNMA1-260ENST00000639483 GIGYF1O75420 1035 aaPredicted RBP19.5■□□□□ 0.71
KCNMA1-260ENST00000639483 DDX21Q9NR30 783 aaKnown RBP eCLIP19.5■□□□□ 0.71
KCNMA1-260ENST00000639483 CNNM1Q9NRU3 951 aa19.5■□□□□ 0.71
KCNMA1-260ENST00000639483 SOS1Q07889 1333 aaPredicted RBP19.5■□□□□ 0.71
KCNMA1-260ENST00000639483 DTNBO60941 627 aa19.5■□□□□ 0.71
KCNMA1-260ENST00000639483 CASTP20810 708 aaKnown RBP19.5■□□□□ 0.71
KCNMA1-260ENST00000639483 BRPF1P55201 1214 aaPredicted RBP19.5■□□□□ 0.71
KCNMA1-260ENST00000639483 SKOR2Q2VWA4 1001 aaPredicted RBP19.5■□□□□ 0.71
KCNMA1-260ENST00000639483 FAM184AQ8NB25 1140 aa19.5■□□□□ 0.71
KCNMA1-260ENST00000639483 BICC1Q9H694 974 aaKnown RBP19.5■□□□□ 0.71
KCNMA1-260ENST00000639483 SLAIN2Q9P270 581 aa19.5■□□□□ 0.71
KCNMA1-260ENST00000639483 ZRSR1Q15695 479 aaKnown RBP19.49■□□□□ 0.71
KCNMA1-260ENST00000639483 DCAF5Q96JK2 942 aa19.49■□□□□ 0.71
KCNMA1-260ENST00000639483 CDC42BPGQ6DT37 1551 aa19.49■□□□□ 0.71
KCNMA1-260ENST00000639483 H3BQV1 296 aa19.49■□□□□ 0.71
KCNMA1-260ENST00000639483 KDM4AO75164 1064 aa19.49■□□□□ 0.71
KCNMA1-260ENST00000639483 IFFO2Q5TF58 517 aa19.49■□□□□ 0.71
KCNMA1-260ENST00000639483 ESYT1Q9BSJ8 1104 aa19.49■□□□□ 0.71
KCNMA1-260ENST00000639483 CEP126Q9P2H0 1117 aa19.48■□□□□ 0.71
KCNMA1-260ENST00000639483 LMBR1LQ6UX01 489 aa19.48■□□□□ 0.71
KCNMA1-260ENST00000639483 NAP1L5Q96NT1 182 aaPredicted RBP19.48■□□□□ 0.71
KCNMA1-260ENST00000639483 SLC52A2Q9HAB3 445 aa19.48■□□□□ 0.71
KCNMA1-260ENST00000639483 A1BGP04217 495 aa19.48■□□□□ 0.71
KCNMA1-260ENST00000639483 IL2RBP14784 551 aa19.47■□□□□ 0.71
KCNMA1-260ENST00000639483 GNL2Q13823 731 aaKnown RBP19.47■□□□□ 0.71
KCNMA1-260ENST00000639483 TCEANC2Q96MN5 208 aa19.47■□□□□ 0.71
KCNMA1-260ENST00000639483 STARD3NLO95772 234 aa19.47■□□□□ 0.71
KCNMA1-260ENST00000639483 RNF214Q8ND24 703 aa19.47■□□□□ 0.71
KCNMA1-260ENST00000639483 SNRKQ9NRH2 765 aa19.47■□□□□ 0.71
KCNMA1-260ENST00000639483 BTG4Q9NY30 223 aa19.47■□□□□ 0.71
KCNMA1-260ENST00000639483 OVOS2A0A0J9YW53 1432 aa19.47■□□□□ 0.71
KCNMA1-260ENST00000639483 OVOS2Q6IE36 1432 aa19.47■□□□□ 0.71
KCNMA1-260ENST00000639483 MAP2P11137 1827 aaKnown RBP19.47■□□□□ 0.71
KCNMA1-260ENST00000639483 ALDH1L1O75891 902 aa19.47■□□□□ 0.71
KCNMA1-260ENST00000639483 CYP46A1Q9Y6A2 500 aa19.47■□□□□ 0.71
KCNMA1-260ENST00000639483 ACSBG1Q96GR2 724 aa19.46■□□□□ 0.71
KCNMA1-260ENST00000639483 FIBPO43427 364 aa19.46■□□□□ 0.71
KCNMA1-260ENST00000639483 USP26Q9BXU7 913 aa19.46■□□□□ 0.71
KCNMA1-260ENST00000639483 EXOC5O00471 708 aa19.46■□□□□ 0.71
KCNMA1-260ENST00000639483 SYAP1Q96A49 352 aaPredicted RBP19.46■□□□□ 0.71
KCNMA1-260ENST00000639483 ERBB3P21860 1342 aa19.45■□□□□ 0.7
KCNMA1-260ENST00000639483 BICDL1Q6ZP65 573 aa19.45■□□□□ 0.7
KCNMA1-260ENST00000639483 MCM2P49736 904 aa19.45■□□□□ 0.7
KCNMA1-260ENST00000639483 DNTTIP2Q5QJE6 756 aaKnown RBP19.45■□□□□ 0.7
KCNMA1-260ENST00000639483 STK11IPQ8N1F8 1099 aa19.45■□□□□ 0.7
KCNMA1-260ENST00000639483 SUCLG2Q96I99 432 aa19.45■□□□□ 0.7
KCNMA1-260ENST00000639483 TECPR2O15040 1411 aa19.45■□□□□ 0.7
KCNMA1-260ENST00000639483 PHKG2P15735 406 aa19.44■□□□□ 0.7
KCNMA1-260ENST00000639483 TTC39AQ5SRH9 613 aa19.44■□□□□ 0.7
KCNMA1-260ENST00000639483 DDX46Q7L014 1031 aaKnown RBP19.44■□□□□ 0.7
KCNMA1-260ENST00000639483 IFT172Q9UG01 1749 aa19.44■□□□□ 0.7
KCNMA1-260ENST00000639483 COL3A1P02461 1466 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms