RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 SIRT1Q96EB6 747 aa5.17□□□□□ -1.58
GYPB-216ENST00000638448 GNEQ9Y223 722 aaKnown RBP5.17□□□□□ -1.58
GYPB-216ENST00000638448 INHAP05111 366 aa5.16□□□□□ -1.58
GYPB-216ENST00000638448 MAP7D1Q3KQU3 841 aa5.16□□□□□ -1.58
GYPB-216ENST00000638448 PGBD3Q8N328 593 aa5.16□□□□□ -1.58
GYPB-216ENST00000638448 SCARF2Q96GP6 870 aaPredicted RBP5.16□□□□□ -1.58
GYPB-216ENST00000638448 FAM196BA6NMK8 535 aa5.15□□□□□ -1.59
GYPB-216ENST00000638448 TMEM229AB2RXF0 380 aa5.15□□□□□ -1.59
GYPB-216ENST00000638448 ATP4AP20648 1035 aa5.15□□□□□ -1.59
GYPB-216ENST00000638448 RFX1P22670 979 aa5.15□□□□□ -1.59
GYPB-216ENST00000638448 LBRQ14739 615 aaKnown RBP5.15□□□□□ -1.59
GYPB-216ENST00000638448 KANK4Q5T7N3 995 aaPredicted RBP5.15□□□□□ -1.59
GYPB-216ENST00000638448 KANK3Q6NY19 840 aa5.15□□□□□ -1.59
GYPB-216ENST00000638448 TBC1D9Q6ZT07 1266 aa5.15□□□□□ -1.59
GYPB-216ENST00000638448 RGS22Q8NE09 1264 aa5.15□□□□□ -1.59
GYPB-216ENST00000638448 ABHD17AQ96GS6 310 aa5.15□□□□□ -1.59
GYPB-216ENST00000638448 CFHR5Q9BXR6 569 aa5.15□□□□□ -1.59
GYPB-216ENST00000638448 ENAMQ9NRM1 1142 aa5.15□□□□□ -1.59
GYPB-216ENST00000638448 SERTAD1Q9UHV2 236 aa5.15□□□□□ -1.59
GYPB-216ENST00000638448 NSFL1CQ9UNZ2 370 aaKnown RBP5.15□□□□□ -1.59
GYPB-216ENST00000638448 USP3Q9Y6I4 520 aa5.15□□□□□ -1.59
GYPB-216ENST00000638448 DNMT3AQ9Y6K1 912 aaPredicted RBP5.15□□□□□ -1.59
GYPB-216ENST00000638448 USP17L3A6NCW0 530 aa5.14□□□□□ -1.59
GYPB-216ENST00000638448 USP17L4A6NCW7 530 aa5.14□□□□□ -1.59
GYPB-216ENST00000638448 MAP2K3P46734 347 aa5.14□□□□□ -1.59
GYPB-216ENST00000638448 MFAP1P55081 439 aaKnown RBP5.14□□□□□ -1.59
GYPB-216ENST00000638448 EFHC2Q5JST6 749 aa5.14□□□□□ -1.59
GYPB-216ENST00000638448 USP17L2Q6R6M4 530 aa5.14□□□□□ -1.59
GYPB-216ENST00000638448 USP17L1Q7RTZ2 530 aa5.14□□□□□ -1.59
GYPB-216ENST00000638448 ZNF295-AS1Q8N0V1 137 aa5.14□□□□□ -1.59
GYPB-216ENST00000638448 NEDD1Q8NHV4 660 aa5.14□□□□□ -1.59
GYPB-216ENST00000638448 OXCT2Q9BYC2 517 aaPredicted RBP5.14□□□□□ -1.59
GYPB-216ENST00000638448 GZF1Q9H116 711 aaPredicted RBP5.14□□□□□ -1.59
GYPB-216ENST00000638448 CRISPLD1Q9H336 500 aa5.14□□□□□ -1.59
GYPB-216ENST00000638448 VRTNQ9H8Y1 702 aa5.14□□□□□ -1.59
GYPB-216ENST00000638448 CNTNAP5Q8WYK1 1306 aa5.14□□□□□ -1.59
GYPB-216ENST00000638448 USP17L5A8MUK1 530 aa5.13□□□□□ -1.59
GYPB-216ENST00000638448 SHISA8B8ZZ34 492 aa5.13□□□□□ -1.59
GYPB-216ENST00000638448 OIP5O43482 229 aa5.13□□□□□ -1.59
GYPB-216ENST00000638448 SKIP12755 728 aa5.13□□□□□ -1.59
GYPB-216ENST00000638448 SMTNP53814 917 aa5.13□□□□□ -1.59
GYPB-216ENST00000638448 NDFIP2Q9NV92 336 aa5.13□□□□□ -1.59
GYPB-216ENST00000638448 DNAAF2Q9NVR5 837 aaKnown RBP5.13□□□□□ -1.59
GYPB-216ENST00000638448 ATXN7L1Q9ULK2 861 aaPredicted RBP5.13□□□□□ -1.59
GYPB-216ENST00000638448 IQSEC3Q9UPP2 1182 aaPredicted RBP5.13□□□□□ -1.59
GYPB-216ENST00000638448 PHF24Q9UPV7 400 aa5.13□□□□□ -1.59
GYPB-216ENST00000638448 BNIP3LO60238 219 aa5.12□□□□□ -1.59
GYPB-216ENST00000638448 FGFR3P22607 806 aa5.12□□□□□ -1.59
GYPB-216ENST00000638448 GTF2IP78347 998 aa5.12□□□□□ -1.59
GYPB-216ENST00000638448 NCOA4Q13772 614 aa5.12□□□□□ -1.59
GYPB-216ENST00000638448 MTFR1Q15390 333 aa5.12□□□□□ -1.59
GYPB-216ENST00000638448 EML3Q32P44 896 aa5.12□□□□□ -1.59
GYPB-216ENST00000638448 GPAT2Q6NUI2 795 aa5.12□□□□□ -1.59
GYPB-216ENST00000638448 C1orf229Q6ZS94 237 aaPredicted RBP5.12□□□□□ -1.59
GYPB-216ENST00000638448 SND1Q7KZF4 910 aaKnown RBP eCLIP5.12□□□□□ -1.595e-6■■■□□ 15.5
GYPB-216ENST00000638448 PODNQ7Z5L7 613 aa5.12□□□□□ -1.59
GYPB-216ENST00000638448 KLRG1Q96E93 195 aa5.12□□□□□ -1.59
GYPB-216ENST00000638448 NIFKQ9BYG3 293 aaKnown RBP5.12□□□□□ -1.59
GYPB-216ENST00000638448 LRRC4BQ9NT99 713 aa5.12□□□□□ -1.59
GYPB-216ENST00000638448 AMOTL2Q9Y2J4 779 aa5.12□□□□□ -1.59
GYPB-216ENST00000638448 PCDHGA11Q9Y5H2 935 aa5.12□□□□□ -1.59
GYPB-216ENST00000638448 A6NJY4 79 aa5.11□□□□□ -1.59
GYPB-216ENST00000638448 PHF20L1A8MW92 1017 aa5.11□□□□□ -1.59
GYPB-216ENST00000638448 C2CD2LO14523 706 aa5.11□□□□□ -1.59
GYPB-216ENST00000638448 BMP4P12644 408 aa5.11□□□□□ -1.59
GYPB-216ENST00000638448 SUZ12Q15022 739 aaKnown RBP5.11□□□□□ -1.59
GYPB-216ENST00000638448 DEPDC4Q8N2C3 294 aa5.11□□□□□ -1.59
GYPB-216ENST00000638448 AIDAQ96BJ3 306 aa5.11□□□□□ -1.59
GYPB-216ENST00000638448 SLC4A9Q96Q91 983 aa5.11□□□□□ -1.59
GYPB-216ENST00000638448 ZMIZ1Q9ULJ6 1067 aa5.11□□□□□ -1.59
GYPB-216ENST00000638448 NOD1Q9Y239 953 aa5.11□□□□□ -1.59
GYPB-216ENST00000638448 DCDC2BA2VCK2 349 aa5.1□□□□□ -1.59
GYPB-216ENST00000638448 SNRPNP63162 240 aaKnown RBP5.1□□□□□ -1.59
GYPB-216ENST00000638448 CTBSQ01459 385 aa5.1□□□□□ -1.59
GYPB-216ENST00000638448 PSME1Q06323 249 aa5.1□□□□□ -1.59
GYPB-216ENST00000638448 SWI5Q1ZZU3 235 aa5.1□□□□□ -1.59
GYPB-216ENST00000638448 NBPF1Q3BBV0 1214 aa5.1□□□□□ -1.59
GYPB-216ENST00000638448 FIGNL1Q6PIW4 674 aa5.1□□□□□ -1.59
GYPB-216ENST00000638448 SLCO4C1Q6ZQN7 724 aa5.1□□□□□ -1.59
GYPB-216ENST00000638448 GOLGA6L1Q8N7Z2 621 aa5.1□□□□□ -1.59
GYPB-216ENST00000638448 C1orf216Q8TAB5 229 aa5.1□□□□□ -1.59
GYPB-216ENST00000638448 ZNF358Q9NW07 568 aa5.1□□□□□ -1.59
GYPB-216ENST00000638448 GDF2Q9UK05 429 aaPredicted RBP5.1□□□□□ -1.59
GYPB-216ENST00000638448 HCN2Q9UL51 889 aa5.1□□□□□ -1.59
GYPB-216ENST00000638448 A0A1W2PNR3 127 aa5.09□□□□□ -1.59
GYPB-216ENST00000638448 USP17L15C9J2P7 530 aa5.09□□□□□ -1.59
GYPB-216ENST00000638448 USP17L10C9JJH3 530 aa5.09□□□□□ -1.59
GYPB-216ENST00000638448 USP17L13C9JLJ4 530 aa5.09□□□□□ -1.59
GYPB-216ENST00000638448 USP17L12C9JPN9 530 aa5.09□□□□□ -1.59
GYPB-216ENST00000638448 USP17L11C9JVI0 530 aa5.09□□□□□ -1.59
GYPB-216ENST00000638448 USP17L21D6R901 530 aa5.09□□□□□ -1.59
GYPB-216ENST00000638448 USP17L18D6R9N7 530 aa5.09□□□□□ -1.59
GYPB-216ENST00000638448 USP17L22D6RA61 530 aa5.09□□□□□ -1.59
GYPB-216ENST00000638448 USP17L17D6RBQ6 530 aa5.09□□□□□ -1.59
GYPB-216ENST00000638448 USP17L19D6RCP7 530 aa5.09□□□□□ -1.59
GYPB-216ENST00000638448 USP17L20D6RJB6 530 aa5.09□□□□□ -1.59
GYPB-216ENST00000638448 CDK2AP1O14519 115 aa5.09□□□□□ -1.59
GYPB-216ENST00000638448 USP17L24Q0WX57 530 aa5.09□□□□□ -1.59
GYPB-216ENST00000638448 PTK7Q13308 1070 aa5.09□□□□□ -1.59
GYPB-216ENST00000638448 CCDC27Q2M243 656 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms