RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 LRRC7Q96NW7 1537 aa9.43□□□□□ -0.9
CDKL5-211ENST00000637881 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.43□□□□□ -0.9
CDKL5-211ENST00000637881 MYO1CO00159 1063 aa9.43□□□□□ -0.9
CDKL5-211ENST00000637881 TPM4P67936 248 aa9.43□□□□□ -0.9
CDKL5-211ENST00000637881 MAP2K1Q02750 393 aaPredicted RBP9.43□□□□□ -0.9
CDKL5-211ENST00000637881 GPS2Q13227 327 aa9.43□□□□□ -0.9
CDKL5-211ENST00000637881 ESCO1Q5FWF5 840 aa9.43□□□□□ -0.9
CDKL5-211ENST00000637881 IQUBQ8NA54 791 aa9.43□□□□□ -0.9
CDKL5-211ENST00000637881 KIF2CQ99661 725 aa9.43□□□□□ -0.9
CDKL5-211ENST00000637881 DEF6Q9H4E7 631 aa9.43□□□□□ -0.9
CDKL5-211ENST00000637881 ATG3Q9NT62 314 aa9.43□□□□□ -0.9
CDKL5-211ENST00000637881 JRKLQ9Y4A0 524 aa9.43□□□□□ -0.9
CDKL5-211ENST00000637881 TECPR2O15040 1411 aa9.43□□□□□ -0.9
CDKL5-211ENST00000637881 UBAP1LF5GYI3 381 aa9.42□□□□□ -0.9
CDKL5-211ENST00000637881 HTATSF1O43719 755 aaKnown RBP9.42□□□□□ -0.9
CDKL5-211ENST00000637881 BCAR3O75815 825 aa9.42□□□□□ -0.9
CDKL5-211ENST00000637881 HDAC1Q13547 482 aaPredicted RBP9.42□□□□□ -0.9
CDKL5-211ENST00000637881 NUDT16Q96DE0 195 aaKnown RBP9.42□□□□□ -0.9
CDKL5-211ENST00000637881 ADAMTS8Q9UP79 889 aa9.42□□□□□ -0.9
CDKL5-211ENST00000637881 PTCH1Q13635 1447 aa9.42□□□□□ -0.9
CDKL5-211ENST00000637881 HMGB1P09429 215 aaKnown RBP9.42□□□□□ -0.9
CDKL5-211ENST00000637881 NBPF9Q3BBW0 867 aa9.42□□□□□ -0.9
CDKL5-211ENST00000637881 TTC31Q49AM3 519 aaPredicted RBP9.42□□□□□ -0.9
CDKL5-211ENST00000637881 NBPF11Q86T75 865 aa9.42□□□□□ -0.9
CDKL5-211ENST00000637881 CADPS2Q86UW7 1296 aa9.42□□□□□ -0.9
CDKL5-211ENST00000637881 CCDC112Q8NEF3 446 aa9.42□□□□□ -0.9
CDKL5-211ENST00000637881 ORAI2Q96SN7 254 aa9.42□□□□□ -0.9
CDKL5-211ENST00000637881 TACO1Q9BSH4 297 aaKnown RBP9.42□□□□□ -0.9
CDKL5-211ENST00000637881 CXorf56Q9H5V9 222 aa9.42□□□□□ -0.9
CDKL5-211ENST00000637881 ZNF446Q9NWS9 450 aa9.42□□□□□ -0.9
CDKL5-211ENST00000637881 COG6Q9Y2V7 657 aa9.42□□□□□ -0.9
CDKL5-211ENST00000637881 PCDHB15Q9Y5E8 787 aa9.42□□□□□ -0.9
CDKL5-211ENST00000637881 XRN1Q8IZH2 1706 aaKnown RBP9.41□□□□□ -0.9
CDKL5-211ENST00000637881 PLEKHG2Q9H7P9 1386 aa9.41□□□□□ -0.9
CDKL5-211ENST00000637881 DLC1Q96QB1 1528 aa9.41□□□□□ -0.9
CDKL5-211ENST00000637881 TDO2P48775 406 aa9.41□□□□□ -0.9
CDKL5-211ENST00000637881 SETQ01105 290 aaPredicted RBP9.41□□□□□ -0.9
CDKL5-211ENST00000637881 TTC12Q9H892 705 aaPredicted RBP9.41□□□□□ -0.9
CDKL5-211ENST00000637881 CABP1Q9NZU7 370 aa9.41□□□□□ -0.9
CDKL5-211ENST00000637881 SLAIN2Q9P270 581 aa9.41□□□□□ -0.9
CDKL5-211ENST00000637881 RBM27Q9P2N5 1060 aaKnown RBP9.41□□□□□ -0.9
CDKL5-211ENST00000637881 CPS1P31327 1500 aa9.4□□□□□ -0.9
CDKL5-211ENST00000637881 CCDC196A0A1B0GTZ2 297 aa9.4□□□□□ -0.9
CDKL5-211ENST00000637881 GOLIM4O00461 696 aa9.4□□□□□ -0.9
CDKL5-211ENST00000637881 PRPF40AO75400 957 aaKnown RBP9.4□□□□□ -0.9
CDKL5-211ENST00000637881 ADCY5O95622 1261 aa9.4□□□□□ -0.9
CDKL5-211ENST00000637881 ZNF853P0CG23 659 aa9.4□□□□□ -0.9
CDKL5-211ENST00000637881 NBPF10Q6P3W6 841 aaKnown RBP9.4□□□□□ -0.9
CDKL5-211ENST00000637881 TMED8Q6PL24 325 aaPredicted RBP9.4□□□□□ -0.9
CDKL5-211ENST00000637881 SRLQ86TD4 932 aa9.4□□□□□ -0.9
CDKL5-211ENST00000637881 ARHGEF28Q8N1W1 1705 aaKnown RBP9.4□□□□□ -0.9
CDKL5-211ENST00000637881 DDX17Q92841 729 aaKnown RBP9.4□□□□□ -0.9
CDKL5-211ENST00000637881 ERO1AQ96HE7 468 aa9.4□□□□□ -0.9
CDKL5-211ENST00000637881 CEP89Q96ST8 783 aa9.4□□□□□ -0.9
CDKL5-211ENST00000637881 SLC12A5Q9H2X9 1139 aa9.4□□□□□ -0.9
CDKL5-211ENST00000637881 PSD3Q9NYI0 1048 aa9.4□□□□□ -0.9
CDKL5-211ENST00000637881 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.4□□□□□ -0.91
CDKL5-211ENST00000637881 NWD1Q149M9 1564 aa9.4□□□□□ -0.91
CDKL5-211ENST00000637881 ADGRL3Q9HAR2 1447 aa9.4□□□□□ -0.91
CDKL5-211ENST00000637881 ATP8B1O43520 1251 aa9.4□□□□□ -0.91
CDKL5-211ENST00000637881 MAGEA9P43362 315 aa9.4□□□□□ -0.91
CDKL5-211ENST00000637881 KMT5BQ4FZB7 885 aa9.4□□□□□ -0.91
CDKL5-211ENST00000637881 BMP2KLQ5H9B9 411 aa9.4□□□□□ -0.91
CDKL5-211ENST00000637881 SYT10Q6XYQ8 523 aa9.4□□□□□ -0.91
CDKL5-211ENST00000637881 NGDNQ8NEJ9 315 aaKnown RBP9.4□□□□□ -0.91
CDKL5-211ENST00000637881 GOLGA5Q8TBA6 731 aa9.4□□□□□ -0.91
CDKL5-211ENST00000637881 PANK1Q8TE04 598 aa9.4□□□□□ -0.91
CDKL5-211ENST00000637881 TTC36A6NLP5 189 aa9.39□□□□□ -0.91
CDKL5-211ENST00000637881 PPP1R12AO14974 1030 aaPredicted RBP9.39□□□□□ -0.91
CDKL5-211ENST00000637881 TOM1O60784 492 aa9.39□□□□□ -0.91
CDKL5-211ENST00000637881 CAPN15O75808 1086 aa9.39□□□□□ -0.91
CDKL5-211ENST00000637881 SSR1P43307 286 aaKnown RBP9.39□□□□□ -0.91
CDKL5-211ENST00000637881 RBM6P78332 1123 aaKnown RBP9.39□□□□□ -0.91
CDKL5-211ENST00000637881 QRICH2Q9H0J4 1663 aa9.39□□□□□ -0.91
CDKL5-211ENST00000637881 PRR36Q9H6K5 1346 aa9.39□□□□□ -0.91
CDKL5-211ENST00000637881 FOXO3O43524 673 aa9.38□□□□□ -0.91
CDKL5-211ENST00000637881 KDM4AO75164 1064 aa9.38□□□□□ -0.91
CDKL5-211ENST00000637881 ATP6V1AP38606 617 aa9.38□□□□□ -0.91
CDKL5-211ENST00000637881 ZKSCAN8Q15776 578 aaPredicted RBP9.38□□□□□ -0.91
CDKL5-211ENST00000637881 MCTP2Q6DN12 878 aa9.38□□□□□ -0.91
CDKL5-211ENST00000637881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.38□□□□□ -0.913e-7■■■■□ 24.6
CDKL5-211ENST00000637881 C10orf67Q8IYJ2 551 aa9.38□□□□□ -0.91
CDKL5-211ENST00000637881 RNF214Q8ND24 703 aa9.38□□□□□ -0.91
CDKL5-211ENST00000637881 FBXO18Q8NFZ0 1043 aa9.38□□□□□ -0.91
CDKL5-211ENST00000637881 TRERF1Q96PN7 1200 aa9.38□□□□□ -0.91
CDKL5-211ENST00000637881 SUFUQ9UMX1 484 aa9.38□□□□□ -0.91
CDKL5-211ENST00000637881 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.38□□□□□ -0.91
CDKL5-211ENST00000637881 CCDC61Q9Y6R9 512 aa9.38□□□□□ -0.91
CDKL5-211ENST00000637881 PTPRCP08575 1304 aa9.38□□□□□ -0.91
CDKL5-211ENST00000637881 KNDC1Q76NI1 1749 aa9.38□□□□□ -0.91
CDKL5-211ENST00000637881 CPP00450 1065 aa9.37□□□□□ -0.91
CDKL5-211ENST00000637881 IVLP07476 585 aa9.37□□□□□ -0.91
CDKL5-211ENST00000637881 TSGA10IPQ3SY00 556 aa9.37□□□□□ -0.91
CDKL5-211ENST00000637881 LMOD2Q6P5Q4 547 aa9.37□□□□□ -0.91
CDKL5-211ENST00000637881 KRBA2Q6ZNG9 492 aa9.37□□□□□ -0.91
CDKL5-211ENST00000637881 C17orf53Q8N3J3 647 aaPredicted RBP9.37□□□□□ -0.91
CDKL5-211ENST00000637881 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
CDKL5-211ENST00000637881 KCNF1Q9H3M0 494 aa9.37□□□□□ -0.91
CDKL5-211ENST00000637881 PYCARDQ9ULZ3 195 aa9.37□□□□□ -0.91
CDKL5-211ENST00000637881 PHF8Q9UPP1 1060 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms