RNA–Protein interactions for RNA: ENST00000636337.1

SPTAN1-231, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-231	ENST00000636337	AFDN	P55196	1824 aa	Known RBP	13.85	□□□□□ -0.19
SPTAN1-231	ENST00000636337	CRKL	P46109	303 aa	Known RBP	13.84	□□□□□ -0.19
SPTAN1-231	ENST00000636337	C2CD5	Q86YS7	1000 aa		13.84	□□□□□ -0.19
SPTAN1-231	ENST00000636337	BEGAIN	Q9BUH8	593 aa		13.84	□□□□□ -0.19
SPTAN1-231	ENST00000636337	GGNBP2	Q9H3C7	697 aa		13.84	□□□□□ -0.19
SPTAN1-231	ENST00000636337	NCAPD2	Q15021	1401 aa		13.83	□□□□□ -0.2
SPTAN1-231	ENST00000636337	IQCA1L	A6NCM1	817 aa		13.83	□□□□□ -0.2
SPTAN1-231	ENST00000636337	EAPP	Q56P03	285 aa	Predicted RBP	13.82	□□□□□ -0.2
SPTAN1-231	ENST00000636337	MCOLN1	Q9GZU1	580 aa		13.82	□□□□□ -0.2
SPTAN1-231	ENST00000636337	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.82	□□□□□ -0.2
SPTAN1-231	ENST00000636337	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
SPTAN1-231	ENST00000636337	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.82	□□□□□ -0.2
SPTAN1-231	ENST00000636337	TSKS	Q9UJT2	592 aa		13.82	□□□□□ -0.2
SPTAN1-231	ENST00000636337	ABT1	Q9ULW3	272 aa	Known RBP	13.82	□□□□□ -0.2
SPTAN1-231	ENST00000636337	SCN4A	P35499	1836 aa		13.81	□□□□□ -0.2
SPTAN1-231	ENST00000636337	FER1L6	Q2WGJ9	1857 aa		13.81	□□□□□ -0.2
SPTAN1-231	ENST00000636337		H0YIN7	160 aa		13.81	□□□□□ -0.2
SPTAN1-231	ENST00000636337	USPL1	Q5W0Q7	1092 aa		13.81	□□□□□ -0.2
SPTAN1-231	ENST00000636337	THSD7B	Q9C0I4	1608 aa		13.81	□□□□□ -0.2
SPTAN1-231	ENST00000636337	ADAMTS7	Q9UKP4	1686 aa		13.81	□□□□□ -0.2
SPTAN1-231	ENST00000636337	KIF24	Q5T7B8	1368 aa		13.81	□□□□□ -0.2
SPTAN1-231	ENST00000636337	NRXN2	Q9P2S2	1712 aa		13.81	□□□□□ -0.2
SPTAN1-231	ENST00000636337	FYB1	O15117	783 aa		13.8	□□□□□ -0.2
SPTAN1-231	ENST00000636337	C21orf2	O43822	256 aa		13.8	□□□□□ -0.2
SPTAN1-231	ENST00000636337	PTCD1	O75127	700 aa	Known RBP	13.8	□□□□□ -0.2
SPTAN1-231	ENST00000636337	ZPR1	O75312	459 aa		13.8	□□□□□ -0.2
SPTAN1-231	ENST00000636337	NFIX	Q14938	502 aa		13.8	□□□□□ -0.2
SPTAN1-231	ENST00000636337	PUS7	Q96PZ0	661 aa	Known RBP	13.8	□□□□□ -0.2
SPTAN1-231	ENST00000636337	CLEC11A	Q9Y240	323 aa		13.8	□□□□□ -0.2
SPTAN1-231	ENST00000636337	ERVV-2	B6SEH9	535 aa		13.79	□□□□□ -0.2
SPTAN1-231	ENST00000636337	GRM1	Q13255	1194 aa		13.79	□□□□□ -0.2
SPTAN1-231	ENST00000636337	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.79	□□□□□ -0.2
SPTAN1-231	ENST00000636337	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.79	□□□□□ -0.2
SPTAN1-231	ENST00000636337	TAOK3	Q9H2K8	898 aa		13.79	□□□□□ -0.2
SPTAN1-231	ENST00000636337	CARMIL3	Q8ND23	1372 aa		13.79	□□□□□ -0.2
SPTAN1-231	ENST00000636337	TONSL	Q96HA7	1378 aa		13.79	□□□□□ -0.2
SPTAN1-231	ENST00000636337	MAP1S	Q66K74	1059 aa	Predicted RBP	13.78	□□□□□ -0.2
SPTAN1-231	ENST00000636337	CAPNS2	Q96L46	248 aa		13.78	□□□□□ -0.2
SPTAN1-231	ENST00000636337	EMILIN1	Q9Y6C2	1016 aa		13.78	□□□□□ -0.2
SPTAN1-231	ENST00000636337	TJP1	Q07157	1748 aa		13.78	□□□□□ -0.2
SPTAN1-231	ENST00000636337	LTBP1	Q14766	1721 aa		13.78	□□□□□ -0.2
SPTAN1-231	ENST00000636337	ADAMTSL1	Q8N6G6	1762 aa		13.78	□□□□□ -0.2
SPTAN1-231	ENST00000636337	SERPINB2	P05120	415 aa		13.77	□□□□□ -0.21
SPTAN1-231	ENST00000636337	PRPF38B	Q5VTL8	546 aa	Known RBP	13.77	□□□□□ -0.21
SPTAN1-231	ENST00000636337	INTS5	Q6P9B9	1019 aa	Known RBP	13.77	□□□□□ -0.21
SPTAN1-231	ENST00000636337	CNTROB	Q8N137	903 aa		13.77	□□□□□ -0.21
SPTAN1-231	ENST00000636337	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
SPTAN1-231	ENST00000636337	GPR101	Q96P66	508 aa	Predicted RBP	13.77	□□□□□ -0.21
SPTAN1-231	ENST00000636337	CARD11	Q9BXL7	1154 aa		13.77	□□□□□ -0.21
SPTAN1-231	ENST00000636337	LTBP3	Q9NS15	1303 aa		13.77	□□□□□ -0.21
SPTAN1-231	ENST00000636337	CASP8AP2	Q9UKL3	1982 aa		13.76	□□□□□ -0.21
SPTAN1-231	ENST00000636337	PPM1G	O15355	546 aa	Predicted RBP	13.76	□□□□□ -0.21
SPTAN1-231	ENST00000636337	ECE1	P42892	770 aa		13.76	□□□□□ -0.21
SPTAN1-231	ENST00000636337	DGKZ	Q13574	1117 aa		13.76	□□□□□ -0.21
SPTAN1-231	ENST00000636337	EYA1	Q99502	592 aa		13.76	□□□□□ -0.21
SPTAN1-231	ENST00000636337	CABP4	P57796	275 aa		13.75	□□□□□ -0.21
SPTAN1-231	ENST00000636337	CYP4F22	Q6NT55	531 aa		13.75	□□□□□ -0.21
SPTAN1-231	ENST00000636337	HACL1	Q9UJ83	578 aa		13.75	□□□□□ -0.21
SPTAN1-231	ENST00000636337	KIF20B	Q96Q89	1820 aa		13.75	□□□□□ -0.21
SPTAN1-231	ENST00000636337	COL11A2	P13942	1736 aa	Predicted RBP	13.74	□□□□□ -0.21
SPTAN1-231	ENST00000636337	EPHX2	P34913	555 aa		13.74	□□□□□ -0.21
SPTAN1-231	ENST00000636337	SOX10	P56693	466 aa		13.74	□□□□□ -0.21
SPTAN1-231	ENST00000636337	SOS1	Q07889	1333 aa	Predicted RBP	13.73	□□□□□ -0.21
SPTAN1-231	ENST00000636337	PNMA8A	Q86V59	439 aa	Predicted RBP	13.73	□□□□□ -0.21
SPTAN1-231	ENST00000636337	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
SPTAN1-231	ENST00000636337	NARF	Q9UHQ1	456 aa		13.73	□□□□□ -0.21
SPTAN1-231	ENST00000636337	ANKRD31	Q8N7Z5	1873 aa		13.73	□□□□□ -0.21
SPTAN1-231	ENST00000636337	ZNF541	Q9H0D2	1346 aa		13.72	□□□□□ -0.21
SPTAN1-231	ENST00000636337	HSP90AB1	P08238	724 aa	Known RBP	13.72	□□□□□ -0.21
SPTAN1-231	ENST00000636337	BCL2L12	Q9HB09	334 aa		13.72	□□□□□ -0.21
SPTAN1-231	ENST00000636337	ANKRD26	Q9UPS8	1709 aa		13.71	□□□□□ -0.21
SPTAN1-231	ENST00000636337	CA12	O43570	354 aa		13.71	□□□□□ -0.21
SPTAN1-231	ENST00000636337	AOC2	O75106	756 aa		13.71	□□□□□ -0.21
SPTAN1-231	ENST00000636337	BICDL1	Q6ZP65	573 aa		13.71	□□□□□ -0.21
SPTAN1-231	ENST00000636337	CACNA1S	Q13698	1873 aa		13.71	□□□□□ -0.21
SPTAN1-231	ENST00000636337	COL15A1	P39059	1388 aa		13.71	□□□□□ -0.22
SPTAN1-231	ENST00000636337	RNF123	Q5XPI4	1314 aa		13.7	□□□□□ -0.22
SPTAN1-231	ENST00000636337	SLX4	Q8IY92	1834 aa		13.7	□□□□□ -0.22
SPTAN1-231	ENST00000636337	PDE6B	P35913	854 aa		13.7	□□□□□ -0.22
SPTAN1-231	ENST00000636337	FMR1	Q06787	632 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
SPTAN1-231	ENST00000636337	DNAJC10	Q8IXB1	793 aa		13.7	□□□□□ -0.22
SPTAN1-231	ENST00000636337	SIN3A	Q96ST3	1273 aa		13.7	□□□□□ -0.22
SPTAN1-231	ENST00000636337	WASHC2A	Q641Q2	1341 aa		13.69	□□□□□ -0.22
SPTAN1-231	ENST00000636337	MAP2K2	P36507	400 aa		13.69	□□□□□ -0.22
SPTAN1-231	ENST00000636337	CCDC24	Q8N4L8	307 aa		13.69	□□□□□ -0.22
SPTAN1-231	ENST00000636337	NFATC2IP	Q8NCF5	419 aa		13.69	□□□□□ -0.22
SPTAN1-231	ENST00000636337	BRIP1	Q9BX63	1249 aa		13.69	□□□□□ -0.22
SPTAN1-231	ENST00000636337	PDZRN3	Q9UPQ7	1066 aa		13.69	□□□□□ -0.22
SPTAN1-231	ENST00000636337	NEUROD1	Q13562	356 aa		13.68	□□□□□ -0.22
SPTAN1-231	ENST00000636337	SOGA3	Q5TF21	947 aa		13.68	□□□□□ -0.22
SPTAN1-231	ENST00000636337	PRPF40B	Q6NWY9	871 aa	Known RBP	13.68	□□□□□ -0.22
SPTAN1-231	ENST00000636337	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.68	□□□□□ -0.22
SPTAN1-231	ENST00000636337	TESK2	Q96S53	571 aa		13.68	□□□□□ -0.22
SPTAN1-231	ENST00000636337	ST20-MTHFS	A0A0A6YYL1	179 aa		13.67	□□□□□ -0.22
SPTAN1-231	ENST00000636337	MTHFS	P49914	203 aa		13.67	□□□□□ -0.22
SPTAN1-231	ENST00000636337	CNKSR1	Q969H4	720 aa		13.67	□□□□□ -0.22
SPTAN1-231	ENST00000636337	TLL2	Q9Y6L7	1015 aa		13.67	□□□□□ -0.22
SPTAN1-231	ENST00000636337	TRPM7	Q96QT4	1865 aa		13.66	□□□□□ -0.22
SPTAN1-231	ENST00000636337	CST9	Q5W186	159 aa		13.66	□□□□□ -0.22
SPTAN1-231	ENST00000636337	ZBTB1	Q9Y2K1	713 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms